Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL031320.1-201ENST00000604177 357 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AL391358.1-201ENST00000605342 190 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC013244.3-201ENST00000605614 388 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC007275.1-201ENST00000621243 671 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AC091953.3-201ENST00000623220 236 ntBASIC5.53□□□□□ -1.52
CIITAP33076 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.53□□□□□ -1.52
CIITAP33076 RBPJP2-201ENST00000618187 1444 ntBASIC5.53□□□□□ -1.52
CIITAP33076 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 AC027228.2-201ENST00000567141 2154 ntBASIC5.53□□□□□ -1.52
CIITAP33076 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
CIITAP33076 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
CIITAP33076 AC104623.2-202ENST00000623477 4002 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC019072.1-201ENST00000604535 1551 ntBASIC5.52□□□□□ -1.53
CIITAP33076 SAMMSON-226ENST00000642089 1582 ntBASIC5.52□□□□□ -1.53
CIITAP33076 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CIITAP33076 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CIITAP33076 RNU4-27P-201ENST00000410889 139 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC114755.2-201ENST00000413520 361 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 AC008072.1-201ENST00000434254 824 ntBASIC5.52□□□□□ -1.53
CIITAP33076 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.52□□□□□ -1.53
CIITAP33076 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.52□□□□□ -1.53
CIITAP33076 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.52□□□□□ -1.53
CIITAP33076 AC245517.2-201ENST00000442890 346 ntBASIC5.52□□□□□ -1.53
CIITAP33076 RNFT1P2-201ENST00000443064 757 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.52□□□□□ -1.53
CIITAP33076 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 IGLV2-34-201ENST00000490007 283 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC016550.3-201ENST00000515706 767 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 BUD31P1-201ENST00000521828 359 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.52□□□□□ -1.53
CIITAP33076 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.52□□□□□ -1.53
CIITAP33076 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.52□□□□□ -1.53
CIITAP33076 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 AC006363.1-201ENST00000603806 463 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AL357094.1-201ENST00000603845 844 ntBASIC5.52□□□□□ -1.53
CIITAP33076 Mico1.1-201ENST00000611698 204 ntBASIC5.52□□□□□ -1.53
CIITAP33076 BNIP3P41-202ENST00000616656 861 ntBASIC5.52□□□□□ -1.53
CIITAP33076 AP001784.1-201ENST00000624107 428 ntBASIC5.52□□□□□ -1.53
CIITAP33076 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
CIITAP33076 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.52□□□□□ -1.53
CIITAP33076 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.52□□□□□ -1.53
CIITAP33076 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CIITAP33076 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CIITAP33076 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 SDAD1P1-202ENST00000524156 2051 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.51□□□□□ -1.53
CIITAP33076 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CIITAP33076 U3.30-201ENST00000391308 210 ntBASIC5.51□□□□□ -1.53
CIITAP33076 GSTA12P-201ENST00000402398 508 ntBASIC5.51□□□□□ -1.53
CIITAP33076 RN7SKP100-201ENST00000411258 284 ntBASIC5.51□□□□□ -1.53
CIITAP33076 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 AC106883.1-201ENST00000418805 562 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC004074.1-201ENST00000421810 1063 ntBASIC5.51□□□□□ -1.53
CIITAP33076 OR6K4P-201ENST00000423179 955 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.51□□□□□ -1.53
CIITAP33076 RPL23AP4-201ENST00000427757 463 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC007563.3-201ENST00000433233 371 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.51□□□□□ -1.53
CIITAP33076 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.51□□□□□ -1.53
CIITAP33076 AC091685.2-201ENST00000454924 864 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.51□□□□□ -1.53
CIITAP33076 RPL32P14-201ENST00000463196 378 ntBASIC5.51□□□□□ -1.53
CIITAP33076 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.51□□□□□ -1.53
CIITAP33076 AC063943.1-201ENST00000465434 453 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CIITAP33076 NPM1P29-201ENST00000483112 803 ntBASIC5.51□□□□□ -1.53
CIITAP33076 RPS3AP6-201ENST00000484430 795 ntBASIC5.51□□□□□ -1.53
CIITAP33076 RN7SL558P-201ENST00000497468 299 ntBASIC5.51□□□□□ -1.53
CIITAP33076 HMGB1P3-201ENST00000502802 616 ntBASIC5.51□□□□□ -1.53
CIITAP33076 PRELID3BP6-201ENST00000503839 571 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC121161.1-201ENST00000510606 652 ntBASIC5.51□□□□□ -1.53
CIITAP33076 ENPP7P9-201ENST00000514456 627 ntBASIC5.51□□□□□ -1.53
CIITAP33076 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.51□□□□□ -1.53
CIITAP33076 AP003066.2-201ENST00000529375 555 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.51□□□□□ -1.53
CIITAP33076 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.51□□□□□ -1.53
CIITAP33076 AL049839.1-201ENST00000556151 657 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AC090666.1-201ENST00000578241 445 ntBASIC5.51□□□□□ -1.53
CIITAP33076 MIR4480-201ENST00000582492 71 ntBASIC5.51□□□□□ -1.53
CIITAP33076 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms