Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RPS17P2-201ENST00000461663 408 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AC091180.1-201ENST00000462104 372 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC026979.1-201ENST00000492525 396 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 RN7SL244P-201ENST00000493405 297 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 NIFKP7-201ENST00000503365 834 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 RNU6-1004P-201ENST00000516584 111 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 HMGB1P46-201ENST00000520062 610 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 OR7E128P-201ENST00000532736 1024 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC13P31276 EDDM3DP-201ENST00000554692 434 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AC006349.1-201ENST00000555526 235 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 NDUFB4P11-201ENST00000560510 395 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 UBE2FP2-201ENST00000566646 462 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC13P31276 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 AC105254.2-201ENST00000603636 436 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 AL021368.1-201ENST00000607490 540 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC003001.2-201ENST00000616294 831 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HOXC13P31276 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC13P31276 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HOXC13P31276 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC13P31276 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 SCARNA15-201ENST00000607520 4325 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.58
HOXC13P31276 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC13P31276 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC13P31276 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HOXC13P31276 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 AC007390.2-201ENST00000606229 3803 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXC13P31276 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC13P31276 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
HOXC13P31276 SNORA62-201ENST00000365493 153 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 RNA5SP187-201ENST00000384400 119 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 RNA5SP332-201ENST00000391063 115 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 CCNB2P1-201ENST00000399411 1150 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 RPS16P5-201ENST00000406501 404 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 OR7E125P-201ENST00000443450 846 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 AC004980.3-201ENST00000447046 365 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 RN7SL385P-201ENST00000468873 276 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 OR52A4P-201ENST00000472867 958 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 SUMO1P1-201ENST00000497904 306 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 COX6B1P5-201ENST00000509843 249 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.2□□□□□ -1.58
HOXC13P31276 RNA5SP43-201ENST00000516559 110 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 AC022790.1-201ENST00000522872 204 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC13P31276 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXC13P31276 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC13P31276 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC13P31276 AC116553.2-201ENST00000564203 463 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 ATP5J2P6-201ENST00000565203 266 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 AC243654.2-201ENST00000612843 443 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 AL354696.1-201ENST00000614652 497 ntBASIC5.2□□□□□ -1.58
HOXC13P31276 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC13P31276 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXC13P31276 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC13P31276 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC13P31276 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 AC009951.1-201ENST00000623674 2614 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms