Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SPRR2C-201ENST00000290702 219 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 RNU1-14P-201ENST00000362759 152 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.91□□□□□ -1.3
CLIP1P30622 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
CLIP1P30622 RN7SKP235-201ENST00000410662 305 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.91□□□□□ -1.3
CLIP1P30622 RPL23AP38-201ENST00000423801 469 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 COX6CP15-201ENST00000426313 211 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CLIP1P30622 AC010374.1-201ENST00000503762 1237 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 AL592156.1-201ENST00000508758 304 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.91□□□□□ -1.3
CLIP1P30622 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP1P30622 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.91□□□□□ -1.3
CLIP1P30622 FAM27D1-201ENST00000612308 341 ntBASIC6.91□□□□□ -1.3
CLIP1P30622 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CLIP1P30622 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CLIP1P30622 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP1P30622 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP1P30622 AC006971.1-201ENST00000407916 4486 ntBASIC6.9□□□□□ -1.3
CLIP1P30622 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
CLIP1P30622 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.9□□□□□ -1.3
CLIP1P30622 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP1P30622 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP1P30622 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CLIP1P30622 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
CLIP1P30622 RN7SKP280-201ENST00000364196 304 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 U3.23-201ENST00000391132 200 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 EIF4A1P3-201ENST00000411521 244 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 RCC2P2-201ENST00000422174 918 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 AL132765.1-201ENST00000434165 553 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CLIP1P30622 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.9□□□□□ -1.31
CLIP1P30622 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.9□□□□□ -1.31
CLIP1P30622 RPS27AP13-201ENST00000498403 237 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.9□□□□□ -1.31
CLIP1P30622 AC090151.1-201ENST00000520784 730 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.9□□□□□ -1.31
CLIP1P30622 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.9□□□□□ -1.31
CLIP1P30622 CYCSP28-201ENST00000534284 321 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.9□□□□□ -1.31
CLIP1P30622 AC025175.1-201ENST00000606482 759 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 AL021997.2-201ENST00000615674 271 ntBASIC6.9□□□□□ -1.31
CLIP1P30622 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.9□□□□□ -1.31
CLIP1P30622 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CLIP1P30622 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CLIP1P30622 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CLIP1P30622 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CLIP1P30622 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CLIP1P30622 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CLIP1P30622 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
CLIP1P30622 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CLIP1P30622 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
CLIP1P30622 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 AC025750.1-201ENST00000399891 379 ntBASIC6.89□□□□□ -1.31
CLIP1P30622 AL356968.2-201ENST00000412769 1257 ntBASIC6.89□□□□□ -1.31
CLIP1P30622 AC104164.2-201ENST00000496953 495 ntBASIC6.89□□□□□ -1.31
CLIP1P30622 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP1P30622 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP1P30622 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.89□□□□□ -1.31
CLIP1P30622 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP1P30622 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP1P30622 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.89□□□□□ -1.31
CLIP1P30622 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
CLIP1P30622 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP1P30622 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CLIP1P30622 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP1P30622 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP1P30622 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP1P30622 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.88□□□□□ -1.31
CLIP1P30622 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP1P30622 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP1P30622 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP1P30622 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.88□□□□□ -1.31
CLIP1P30622 AC020593.1-201ENST00000507399 299 ntBASIC6.88□□□□□ -1.31
CLIP1P30622 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.88□□□□□ -1.31
CLIP1P30622 MIR8059-201ENST00000620427 81 ntBASIC6.88□□□□□ -1.31
CLIP1P30622 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CLIP1P30622 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.88□□□□□ -1.31
CLIP1P30622 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.88□□□□□ -1.31
CLIP1P30622 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLIP1P30622 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.87□□□□□ -1.31
CLIP1P30622 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 SNORA48.7-201ENST00000391302 135 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 RPL32P23-201ENST00000397237 405 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 RNA5SP36-201ENST00000410197 133 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 MIR1911-201ENST00000410783 80 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP1P30622 PPIAP13-201ENST00000434706 478 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms