Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.75□□□□□ -1.49
TM4SF1P30408 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.75□□□□□ -1.49
TM4SF1P30408 AC004241.3-201ENST00000611728 517 ntBASIC5.75□□□□□ -1.49
TM4SF1P30408 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.75□□□□□ -1.49
TM4SF1P30408 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.75□□□□□ -1.49
TM4SF1P30408 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 MTND4P21-201ENST00000453886 1357 ntBASIC5.75□□□□□ -1.49
TM4SF1P30408 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.75□□□□□ -1.49
TM4SF1P30408 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
TM4SF1P30408 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TM4SF1P30408 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 AL031119.1-201ENST00000404707 1879 ntBASIC5.75□□□□□ -1.49
TM4SF1P30408 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TM4SF1P30408 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TM4SF1P30408 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TM4SF1P30408 AP001029.2-203ENST00000589795 4910 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 PCNPP4-201ENST00000414817 517 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TM4SF1P30408 RPS3AP54-201ENST00000435535 734 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 MTCYBP29-201ENST00000436327 1006 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.74□□□□□ -1.49
TM4SF1P30408 RPL7P33-201ENST00000444159 742 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.74□□□□□ -1.49
TM4SF1P30408 MTND2P25-201ENST00000449028 610 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AC107015.1-201ENST00000466902 747 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 LARP7P4-201ENST00000481075 878 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC093770.1-201ENST00000511559 571 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.74□□□□□ -1.49
TM4SF1P30408 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC109635.6-201ENST00000525487 1113 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.74□□□□□ -1.49
TM4SF1P30408 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC040174.2-201ENST00000602701 465 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AC084373.1-201ENST00000603311 235 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC005021.1-201ENST00000608730 355 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 SNX18P1Y-201ENST00000616231 511 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 AC079298.2-201ENST00000623885 459 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 RLIMP2-201ENST00000427891 1563 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 AL121950.1-201ENST00000624993 2077 ntBASIC5.74□□□□□ -1.49
TM4SF1P30408 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.74□□□□□ -1.49
TM4SF1P30408 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TM4SF1P30408 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TM4SF1P30408 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.74□□□□□ -1.49
TM4SF1P30408 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TM4SF1P30408 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 OR5P1P-201ENST00000299512 925 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 AL034403.1-201ENST00000399414 885 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AL022722.2-201ENST00000402519 180 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 PPIAP31-201ENST00000405422 495 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AC013429.2-201ENST00000418798 781 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 E2F6P2-201ENST00000420708 748 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.73□□□□□ -1.49
TM4SF1P30408 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AC011998.1-201ENST00000433403 117 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AC245517.2-201ENST00000442890 346 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 HAUS1P1-201ENST00000505275 832 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.73□□□□□ -1.49
TM4SF1P30408 SETP12-201ENST00000514068 805 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AL135786.2-201ENST00000608422 615 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.73□□□□□ -1.49
TM4SF1P30408 AL356490.1-201ENST00000623079 479 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 AL356094.1-201ENST00000624663 1212 ntBASIC5.73□□□□□ -1.49
TM4SF1P30408 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.73□□□□□ -1.49
TM4SF1P30408 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM4SF1P30408 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms