Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 OR8A2P-201ENST00000528631 952 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 CR383656.6-201ENST00000550518 394 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC009712.1-201ENST00000564938 316 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.28□□□□□ -1.4
CNGA1P29973 AL392112.1-201ENST00000605115 829 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 NANOGP3-201ENST00000605855 286 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AP000238.1-201ENST00000608759 426 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC092106.3-201ENST00000611308 722 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC025574.2-201ENST00000615621 514 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC139769.3-201ENST00000618383 175 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 HSPA8P18-201ENST00000439846 1928 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 AC005261.4-201ENST00000600047 1385 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 AL360270.2-201ENST00000562952 5985 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CNGA1P29973 AC083843.2-201ENST00000568248 6253 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNGA1P29973 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC011933.2-201ENST00000578539 2790 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC000367.1-201ENST00000452711 1766 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 RNA5SP339-201ENST00000390987 122 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 DUTP5-201ENST00000406790 469 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.27□□□□□ -1.41
CNGA1P29973 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 OR4K6P-201ENST00000416478 897 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC114814.2-201ENST00000419195 485 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 GAPDHP49-201ENST00000421421 961 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.27□□□□□ -1.41
CNGA1P29973 MRPL35P4-201ENST00000453682 566 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AL389915.2-201ENST00000454576 441 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 RPL12P39-201ENST00000455456 496 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 PDCL3P4-201ENST00000489621 720 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 SNRPCP2-201ENST00000504370 475 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 RNU6-416P-201ENST00000516265 103 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 IGLV3-24-201ENST00000517477 197 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.27□□□□□ -1.41
CNGA1P29973 HMGB1P40-201ENST00000525121 540 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AP001922.4-201ENST00000526967 290 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 NIFKP8-201ENST00000560500 874 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 MIR4666A-201ENST00000580160 79 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC061975.8-201ENST00000587058 721 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 AC091057.2-201ENST00000602594 792 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.27□□□□□ -1.41
CNGA1P29973 AC007349.4-201ENST00000608114 532 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 MTND2P41-201ENST00000637599 773 ntBASIC6.27□□□□□ -1.41
CNGA1P29973 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.27□□□□□ -1.41
CNGA1P29973 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.27□□□□□ -1.41
CNGA1P29973 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNGA1P29973 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CNGA1P29973 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CNGA1P29973 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CNGA1P29973 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.26□□□□□ -1.41
CNGA1P29973 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNGA1P29973 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNGA1P29973 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.26□□□□□ -1.41
CNGA1P29973 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNGA1P29973 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms