Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 DDX39BP2-208ENST00000453923 258 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC007991.1-201ENST00000522680 631 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC127024.5-201ENST00000580085 462 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 RN7SL435P-201ENST00000584418 282 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A5P29400 AC007179.3-201ENST00000604976 235 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 SNORA51-201ENST00000606420 132 ntBASIC5.13□□□□□ -1.59
COL4A5P29400 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A5P29400 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A5P29400 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A5P29400 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
COL4A5P29400 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL4A5P29400 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A5P29400 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
COL4A5P29400 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A5P29400 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL4A5P29400 CASC19-261ENST00000641853 1638 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 RNA5SP175-201ENST00000364275 119 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC108032.1-201ENST00000416706 207 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A5P29400 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A5P29400 RN7SKP157-201ENST00000516174 282 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
COL4A5P29400 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 AC027216.1-201ENST00000577726 685 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC087499.8-201ENST00000578406 226 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 PRELID3BP3-201ENST00000584963 545 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 BNIP3P19-201ENST00000605397 577 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC007546.2-201ENST00000623996 360 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A5P29400 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL4A5P29400 AL359922.3-201ENST00000624779 1670 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A5P29400 RNA5SP307-201ENST00000362863 116 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.12□□□□□ -1.59
COL4A5P29400 ATP5G1P3-201ENST00000463301 410 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 RPL7P22-201ENST00000466005 733 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC007688.1-201ENST00000475592 759 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A5P29400 AC026403.1-201ENST00000518938 295 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 AC022655.2-201ENST00000577280 318 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A5P29400 RNA5SP439-201ENST00000617595 124 ntBASIC5.12□□□□□ -1.59
COL4A5P29400 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A5P29400 AC016588.2-201ENST00000632484 3021 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A5P29400 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A5P29400 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
COL4A5P29400 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A5P29400 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A5P29400 AL157385.1-201ENST00000446973 268 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A5P29400 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL4A5P29400 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A5P29400 RPL23AP97-201ENST00000568955 471 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 MIR3200-201ENST00000580767 85 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 AC091178.1-203ENST00000584586 279 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 AC090912.3-201ENST00000609775 533 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A5P29400 AC012314.7-201ENST00000619693 93 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 AC009093.8-201ENST00000641769 292 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A5P29400 AC140134.1-201ENST00000511830 3544 ntBASIC5.11□□□□□ -1.59
COL4A5P29400 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COL4A5P29400 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A5P29400 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A5P29400 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A5P29400 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL4A5P29400 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms