Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CD40P25942 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 AC022905.1-201ENST00000503430 3048 ntBASIC5.36□□□□□ -1.55
CD40P25942 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 Y_RNA.41-201ENST00000362646 102 ntBASIC5.36□□□□□ -1.55
CD40P25942 RNU1-134P-201ENST00000362935 165 ntBASIC5.36□□□□□ -1.55
CD40P25942 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 Y_RNA.516-201ENST00000384541 124 ntBASIC5.36□□□□□ -1.55
CD40P25942 MTCYBP36-201ENST00000404146 440 ntBASIC5.36□□□□□ -1.55
CD40P25942 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 AC073264.1-201ENST00000411508 416 ntBASIC5.36□□□□□ -1.55
CD40P25942 RPS7P8-201ENST00000418311 581 ntBASIC5.36□□□□□ -1.55
CD40P25942 RPL36P18-201ENST00000419316 318 ntBASIC5.36□□□□□ -1.55
CD40P25942 CYP4F30P-202ENST00000420048 405 ntBASIC5.36□□□□□ -1.55
CD40P25942 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40P25942 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 AL512649.1-201ENST00000428997 581 ntBASIC5.36□□□□□ -1.55
CD40P25942 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 Z74696.2-201ENST00000436514 498 ntBASIC5.36□□□□□ -1.55
CD40P25942 YWHAZP8-201ENST00000436935 731 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC092427.1-201ENST00000439177 601 ntBASIC5.36□□□□□ -1.55
CD40P25942 ATP5LP2-201ENST00000440646 311 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40P25942 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 TRGVB-201ENST00000453257 471 ntBASIC5.36□□□□□ -1.55
CD40P25942 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 AC006511.1-201ENST00000470614 315 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 KLRA1P-201ENST00000503499 986 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 RNA5SP400-201ENST00000517155 111 ntBASIC5.36□□□□□ -1.55
CD40P25942 OR4A45P-201ENST00000529954 901 ntBASIC5.36□□□□□ -1.55
CD40P25942 CR383656.6-201ENST00000550518 394 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 NMNAT1P1-201ENST00000554095 876 ntBASIC5.36□□□□□ -1.55
CD40P25942 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40P25942 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 AC136618.2-201ENST00000575091 400 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.36□□□□□ -1.55
CD40P25942 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.36□□□□□ -1.55
CD40P25942 CYCSP1-201ENST00000604815 315 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC092794.1-201ENST00000612734 582 ntBASIC5.36□□□□□ -1.55
CD40P25942 AC116165.2-201ENST00000616705 206 ntBASIC5.36□□□□□ -1.55
CD40P25942 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 AC099654.6-201ENST00000636487 512 ntBASIC5.36□□□□□ -1.55
CD40P25942 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 USP9YP4-201ENST00000424401 1745 ntBASIC5.36□□□□□ -1.55
CD40P25942 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.36□□□□□ -1.55
CD40P25942 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.35□□□□□ -1.55
CD40P25942 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 AC005618.1-201ENST00000606901 3148 ntBASIC5.35□□□□□ -1.55
CD40P25942 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.35□□□□□ -1.55
CD40P25942 AC011416.1-201ENST00000514947 1732 ntBASIC5.35□□□□□ -1.55
CD40P25942 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CD40P25942 AC092447.7-201ENST00000422212 1621 ntBASIC5.35□□□□□ -1.55
CD40P25942 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.35□□□□□ -1.55
CD40P25942 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD40P25942 SNORA43.1-201ENST00000364863 140 ntBASIC5.35□□□□□ -1.55
CD40P25942 MIR130B-202ENST00000385018 82 ntBASIC5.35□□□□□ -1.55
CD40P25942 RNU1-149P-201ENST00000390870 161 ntBASIC5.35□□□□□ -1.55
CD40P25942 SNRPEP2-201ENST00000397592 279 ntBASIC5.35□□□□□ -1.55
CD40P25942 AL132875.1-201ENST00000403623 949 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms