Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RPL6P5-201ENST00000445678 828 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 RPS7P7-201ENST00000463499 571 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A1P20908 AL133372.1-201ENST00000493565 745 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
COL5A1P20908 AF131215.7-201ENST00000602443 707 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AL160281.1-201ENST00000605307 311 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC069200.1-201ENST00000609511 323 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC005858.4-201ENST00000623191 700 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A1P20908 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A1P20908 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
COL5A1P20908 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
COL5A1P20908 RNU1-132P-201ENST00000364300 164 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 AL359643.1-201ENST00000404109 423 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
COL5A1P20908 RNU6-628P-201ENST00000410675 107 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 YY1P1-201ENST00000427625 668 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 AC079804.1-201ENST00000461922 436 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 MTND4LP31-201ENST00000514859 294 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 RNA5SP249-201ENST00000516127 99 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 SNORA74D-201ENST00000516404 141 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.28□□□□□ -1.72
COL5A1P20908 MIR3944-201ENST00000581277 108 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC008739.3-201ENST00000603262 127 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC023762.1-201ENST00000603280 584 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.28□□□□□ -1.72
COL5A1P20908 TCP11X1-202ENST00000622971 1372 ntBASIC4.28□□□□□ -1.72
COL5A1P20908 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL5A1P20908 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL5A1P20908 AC005261.2-201ENST00000593427 4258 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
COL5A1P20908 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
COL5A1P20908 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 AC106871.1-201ENST00000568324 3102 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 AC032011.1-201ENST00000611703 1549 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL5A1P20908 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL5A1P20908 MT-RNR1-201ENST00000389680 954 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AC093578.1-201ENST00000415219 368 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A1P20908 AL139095.3-201ENST00000419672 1203 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 KATNBL1P2-201ENST00000433311 835 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 ARL4AP4-201ENST00000434170 518 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A1P20908 TPT1P1-201ENST00000458495 518 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 RNA5SP103-201ENST00000459503 118 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.27□□□□□ -1.73
COL5A1P20908 AC108064.1-201ENST00000513791 460 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 RNA5SP446-201ENST00000515955 82 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AC105233.3-201ENST00000531125 744 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.27□□□□□ -1.73
COL5A1P20908 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.27□□□□□ -1.73
COL5A1P20908 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.27□□□□□ -1.73
COL5A1P20908 AC015871.5-202ENST00000623252 701 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 AC138965.3-201ENST00000623875 498 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 TMEM30CP-203ENST00000637814 1035 ntBASIC4.27□□□□□ -1.73
COL5A1P20908 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL5A1P20908 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
COL5A1P20908 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
COL5A1P20908 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL5A1P20908 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
COL5A1P20908 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.26□□□□□ -1.73
COL5A1P20908 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.26□□□□□ -1.73
COL5A1P20908 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL5A1P20908 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms