Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NIP7P2-201ENST00000485801 544 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC069304.1-201ENST00000491593 704 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC023424.1-201ENST00000496058 459 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 HMGB3P16-201ENST00000508037 287 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 NDUFB5P1-201ENST00000508134 564 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 NOP56P3-201ENST00000549457 385 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 MIR4716-201ENST00000579628 84 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC011487.3-201ENST00000593607 453 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC110792.4-201ENST00000609843 298 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 MIR7973-1-201ENST00000614683 76 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC012414.7-202ENST00000622705 1090 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 INTS6P1-201ENST00000504674 2530 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC009501.3-201ENST00000605001 1352 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC107068.1-201ENST00000563286 4218 ntBASIC4.9□□□□□ -1.62
HLA-DPA1P20036 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HLA-DPA1P20036 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HLA-DPA1P20036 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-DPA1P20036 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 CCNB2P1-201ENST00000399411 1150 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 SNORA11B-201ENST00000408175 129 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RPS20P25-201ENST00000412447 352 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 SEC63P1-201ENST00000425785 1258 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 VN1R54P-201ENST00000435210 1049 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RPL23AP56-201ENST00000460778 453 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 OR9N1P-202ENST00000494289 481 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RN7SL591P-201ENST00000496150 292 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RN7SL558P-201ENST00000497468 299 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 GAPDHP56-201ENST00000506031 988 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RNA5SP392-201ENST00000516905 112 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 RNU6-709P-201ENST00000517257 104 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 PDCD5P1-201ENST00000543528 309 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC020910.3-201ENST00000603701 874 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL355816.1-201ENST00000607951 118 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC133644.2-201ENST00000608142 540 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC123768.4-201ENST00000616244 701 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL162233.1-201ENST00000620014 944 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 BMS1P21-201ENST00000634565 365 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 AL731532.2-201ENST00000623542 1953 ntBASIC4.9□□□□□ -1.63
HLA-DPA1P20036 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPA1P20036 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 RN7SKP104-201ENST00000362605 328 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL109941.1-201ENST00000401925 229 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 U3.35-201ENST00000408405 208 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 RPS24P8-201ENST00000431490 402 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL451139.1-201ENST00000434718 346 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC112498.1-201ENST00000444401 332 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 OTX2P1-201ENST00000450956 354 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AP000942.1-201ENST00000463969 747 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms