Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 VN1R54P-201ENST00000435210 1049 ntBASIC4.81□□□□□ -1.64
CD48P09326 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
CD48P09326 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 AC091685.2-201ENST00000454924 864 ntBASIC4.81□□□□□ -1.64
CD48P09326 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 RN7SL826P-201ENST00000479724 288 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC025164.1-201ENST00000496249 478 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC093890.1-201ENST00000502554 540 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.81□□□□□ -1.64
CD48P09326 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.81□□□□□ -1.64
CD48P09326 AL671862.1-201ENST00000515851 349 ntBASIC4.81□□□□□ -1.64
CD48P09326 SEC11B-201ENST00000518383 499 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 AP001922.4-201ENST00000526967 290 ntBASIC4.81□□□□□ -1.64
CD48P09326 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.81□□□□□ -1.64
CD48P09326 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.81□□□□□ -1.64
CD48P09326 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
CD48P09326 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CD48P09326 MIR4737-201ENST00000583979 81 ntBASIC4.81□□□□□ -1.64
CD48P09326 MIR4760-201ENST00000585040 80 ntBASIC4.81□□□□□ -1.64
CD48P09326 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.81□□□□□ -1.64
CD48P09326 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD48P09326 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD48P09326 AC233280.2-201ENST00000603917 1070 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC135178.6-201ENST00000605314 398 ntBASIC4.81□□□□□ -1.64
CD48P09326 MIR6798-201ENST00000612887 67 ntBASIC4.81□□□□□ -1.64
CD48P09326 AL445493.3-201ENST00000619568 477 ntBASIC4.81□□□□□ -1.64
CD48P09326 AC241377.1-201ENST00000619797 406 ntBASIC4.81□□□□□ -1.64
CD48P09326 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD48P09326 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
CD48P09326 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD48P09326 AC120338.1-201ENST00000625074 1541 ntBASIC4.81□□□□□ -1.64
CD48P09326 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD48P09326 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.81□□□□□ -1.64
CD48P09326 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD48P09326 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
CD48P09326 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.8□□□□□ -1.64
CD48P09326 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 RNU6-697P-201ENST00000363348 107 ntBASIC4.8□□□□□ -1.64
CD48P09326 RNU6-925P-201ENST00000384629 104 ntBASIC4.8□□□□□ -1.64
CD48P09326 AL035405.1-201ENST00000400795 710 ntBASIC4.8□□□□□ -1.64
CD48P09326 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 TRIM60P17-201ENST00000415181 719 ntBASIC4.8□□□□□ -1.64
CD48P09326 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.8□□□□□ -1.64
CD48P09326 SFR1P2-201ENST00000421841 730 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.8□□□□□ -1.64
CD48P09326 H2AFZP5-201ENST00000446960 382 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC078857.1-201ENST00000469870 667 ntBASIC4.8□□□□□ -1.64
CD48P09326 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.8□□□□□ -1.64
CD48P09326 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.8□□□□□ -1.64
CD48P09326 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.8□□□□□ -1.64
CD48P09326 RFPL4AP5-201ENST00000514977 504 ntBASIC4.8□□□□□ -1.64
CD48P09326 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.8□□□□□ -1.64
CD48P09326 OR5M2P-201ENST00000529003 936 ntBASIC4.8□□□□□ -1.64
CD48P09326 BRD9P1-201ENST00000529855 560 ntBASIC4.8□□□□□ -1.64
CD48P09326 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.8□□□□□ -1.64
CD48P09326 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.8□□□□□ -1.64
CD48P09326 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 EDDM3DP-201ENST00000554692 434 ntBASIC4.8□□□□□ -1.64
CD48P09326 CKS1BP1-201ENST00000555221 240 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC106785.3-201ENST00000564064 847 ntBASIC4.8□□□□□ -1.64
CD48P09326 UBE2FP2-201ENST00000566646 462 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.8□□□□□ -1.64
CD48P09326 AC006116.7-201ENST00000590141 756 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC098935.2-201ENST00000604222 466 ntBASIC4.8□□□□□ -1.64
CD48P09326 KATNBL1P5-201ENST00000605015 517 ntBASIC4.8□□□□□ -1.64
CD48P09326 AL021707.7-201ENST00000607991 416 ntBASIC4.8□□□□□ -1.64
CD48P09326 AP003499.2-201ENST00000624100 483 ntBASIC4.8□□□□□ -1.64
CD48P09326 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.8□□□□□ -1.64
CD48P09326 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.8□□□□□ -1.64
CD48P09326 TMEM30CP-203ENST00000637814 1035 ntBASIC4.8□□□□□ -1.64
CD48P09326 AC009452.1-201ENST00000640823 606 ntBASIC4.8□□□□□ -1.64
CD48P09326 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CD48P09326 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD48P09326 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD48P09326 AC108751.5-201ENST00000492880 1336 ntBASIC4.79□□□□□ -1.64
CD48P09326 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CD48P09326 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD48P09326 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD48P09326 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD48P09326 RNA5SP151-201ENST00000365632 117 ntBASIC4.79□□□□□ -1.64
CD48P09326 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD48P09326 ATG4AP1-201ENST00000416893 538 ntBASIC4.79□□□□□ -1.64
CD48P09326 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.79□□□□□ -1.64
CD48P09326 BX510359.2-201ENST00000417920 305 ntBASIC4.79□□□□□ -1.64
CD48P09326 AC007394.1-201ENST00000421941 531 ntBASIC4.79□□□□□ -1.64
CD48P09326 NPM1P26-201ENST00000426339 738 ntBASIC4.79□□□□□ -1.64
CD48P09326 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.79□□□□□ -1.64
CD48P09326 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.79□□□□□ -1.64
CD48P09326 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.79□□□□□ -1.64
CD48P09326 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms