Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTSDP07339 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTSDP07339 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.73□□□□□ -1.81
CTSDP07339 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSDP07339 AC125257.1-201ENST00000560400 2930 ntBASIC3.73□□□□□ -1.81
CTSDP07339 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.73□□□□□ -1.81
CTSDP07339 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
CTSDP07339 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTSDP07339 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.72□□□□□ -1.81
CTSDP07339 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 LINC00622-201ENST00000562811 1570 ntBASIC3.72□□□□□ -1.81
CTSDP07339 SAMMSON-226ENST00000642089 1582 ntBASIC3.72□□□□□ -1.81
CTSDP07339 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.72□□□□□ -1.81
CTSDP07339 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSDP07339 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 RN7SKP95-201ENST00000362860 303 ntBASIC3.72□□□□□ -1.81
CTSDP07339 RNA5SP123-201ENST00000363244 119 ntBASIC3.72□□□□□ -1.81
CTSDP07339 RNA5SP513-201ENST00000364648 118 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSDP07339 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 EIF4A1P3-201ENST00000411521 244 ntBASIC3.72□□□□□ -1.81
CTSDP07339 CHEK2P3-201ENST00000416118 248 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 NANOGP6-201ENST00000429190 847 ntBASIC3.72□□□□□ -1.81
CTSDP07339 OR2B7P-201ENST00000429302 934 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC013410.1-201ENST00000436223 1232 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC112498.1-201ENST00000444401 332 ntBASIC3.72□□□□□ -1.81
CTSDP07339 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.72□□□□□ -1.81
CTSDP07339 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.72□□□□□ -1.81
CTSDP07339 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSDP07339 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 HNRNPKP5-201ENST00000515300 253 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSDP07339 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.72□□□□□ -1.81
CTSDP07339 AC008126.1-201ENST00000549019 480 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC105129.1-201ENST00000560250 297 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.72□□□□□ -1.81
CTSDP07339 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.72□□□□□ -1.81
CTSDP07339 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.72□□□□□ -1.81
CTSDP07339 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 AL160290.3-201ENST00000604869 165 ntBASIC3.72□□□□□ -1.81
CTSDP07339 Z98200.1-201ENST00000607298 470 ntBASIC3.72□□□□□ -1.81
CTSDP07339 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 AC074276.2-201ENST00000619891 348 ntBASIC3.72□□□□□ -1.81
CTSDP07339 AC068870.2-201ENST00000620635 389 ntBASIC3.72□□□□□ -1.81
CTSDP07339 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.72□□□□□ -1.81
CTSDP07339 A2MP1-204ENST00000566278 4130 ntBASIC3.72□□□□□ -1.81
CTSDP07339 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTSDP07339 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.71□□□□□ -1.81
CTSDP07339 MAPK10-304ENST00000641341 3984 ntBASIC3.71□□□□□ -1.81
CTSDP07339 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.71□□□□□ -1.81
CTSDP07339 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSDP07339 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSDP07339 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTSDP07339 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTSDP07339 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTSDP07339 AL645927.1-201ENST00000396783 406 ntBASIC3.71□□□□□ -1.82
CTSDP07339 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSDP07339 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 ELOCP8-201ENST00000439309 332 ntBASIC3.71□□□□□ -1.82
CTSDP07339 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 ELOCP15-201ENST00000442090 332 ntBASIC3.71□□□□□ -1.82
CTSDP07339 SUMO2P1-206ENST00000445436 284 ntBASIC3.71□□□□□ -1.82
CTSDP07339 TRY2P-201ENST00000448860 689 ntBASIC3.71□□□□□ -1.82
CTSDP07339 ABCF2P2-201ENST00000450549 296 ntBASIC3.71□□□□□ -1.82
CTSDP07339 AL162388.1-201ENST00000450912 352 ntBASIC3.71□□□□□ -1.82
CTSDP07339 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSDP07339 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.71□□□□□ -1.82
CTSDP07339 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.71□□□□□ -1.82
CTSDP07339 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTSDP07339 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 AC005000.1-201ENST00000536192 288 ntBASIC3.71□□□□□ -1.82
CTSDP07339 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 GCSHP4-201ENST00000538792 439 ntBASIC3.71□□□□□ -1.82
CTSDP07339 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.71□□□□□ -1.82
CTSDP07339 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.71□□□□□ -1.82
CTSDP07339 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.71□□□□□ -1.82
CTSDP07339 MIR432-201ENST00000606207 94 ntBASIC3.71□□□□□ -1.82
CTSDP07339 AC020634.1-201ENST00000608701 549 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms