Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC018797.3-201ENST00000513388 1241 ntBASIC5.05□□□□□ -1.6
TPM3P06753 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM3P06753 AC026124.2-201ENST00000621847 656 ntBASIC5.05□□□□□ -1.6
TPM3P06753 AC093311.1-201ENST00000506586 2021 ntBASIC5.05□□□□□ -1.6
TPM3P06753 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM3P06753 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM3P06753 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
TPM3P06753 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
TPM3P06753 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM3P06753 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TPM3P06753 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM3P06753 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 U3.25-201ENST00000391209 220 ntBASIC5.04□□□□□ -1.6
TPM3P06753 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM3P06753 RPSAP41-201ENST00000439695 860 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC022431.1-201ENST00000450941 438 ntBASIC5.04□□□□□ -1.6
TPM3P06753 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
TPM3P06753 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC109462.1-201ENST00000491087 368 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM3P06753 HIGD1AP14-201ENST00000507617 282 ntBASIC5.04□□□□□ -1.6
TPM3P06753 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.04□□□□□ -1.6
TPM3P06753 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM3P06753 AC013701.1-201ENST00000522657 465 ntBASIC5.04□□□□□ -1.6
TPM3P06753 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM3P06753 PHBP17-201ENST00000528576 541 ntBASIC5.04□□□□□ -1.6
TPM3P06753 DEFB109D-201ENST00000529497 240 ntBASIC5.04□□□□□ -1.6
TPM3P06753 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM3P06753 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM3P06753 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM3P06753 AC006116.3-201ENST00000592968 361 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC008536.1-201ENST00000602872 669 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC103792.1-201ENST00000603591 919 ntBASIC5.04□□□□□ -1.6
TPM3P06753 MIR432-201ENST00000606207 94 ntBASIC5.04□□□□□ -1.6
TPM3P06753 AC004808.2-201ENST00000627965 773 ntBASIC5.04□□□□□ -1.6
TPM3P06753 LINC01739-205ENST00000641890 573 ntBASIC5.04□□□□□ -1.6
TPM3P06753 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 PABPC1P6-201ENST00000445594 1829 ntBASIC5.04□□□□□ -1.6
TPM3P06753 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM3P06753 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.04□□□□□ -1.6
TPM3P06753 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 KARSP3-201ENST00000571212 1504 ntBASIC5.03□□□□□ -1.6
TPM3P06753 AL451142.2-201ENST00000429076 2090 ntBASIC5.03□□□□□ -1.6
TPM3P06753 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
TPM3P06753 RNA5SP307-201ENST00000362863 116 ntBASIC5.03□□□□□ -1.6
TPM3P06753 RNA5SP513-201ENST00000364648 118 ntBASIC5.03□□□□□ -1.6
TPM3P06753 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TPM3P06753 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.03□□□□□ -1.6
TPM3P06753 OR51B3P-201ENST00000412287 913 ntBASIC5.03□□□□□ -1.6
TPM3P06753 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 RPS6P12-201ENST00000432491 726 ntBASIC5.03□□□□□ -1.6
TPM3P06753 HMGB3P10-201ENST00000434734 572 ntBASIC5.03□□□□□ -1.6
TPM3P06753 RPS20P1-201ENST00000434853 354 ntBASIC5.03□□□□□ -1.6
TPM3P06753 AC092647.3-201ENST00000443044 633 ntBASIC5.03□□□□□ -1.6
TPM3P06753 AC112498.1-201ENST00000444401 332 ntBASIC5.03□□□□□ -1.6
TPM3P06753 IGLV2-34-201ENST00000490007 283 ntBASIC5.03□□□□□ -1.6
TPM3P06753 RPL7P51-201ENST00000490532 749 ntBASIC5.03□□□□□ -1.6
TPM3P06753 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM3P06753 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.03□□□□□ -1.6
TPM3P06753 AC017037.1-201ENST00000508460 471 ntBASIC5.03□□□□□ -1.6
TPM3P06753 RN7SKP147-201ENST00000517154 244 ntBASIC5.03□□□□□ -1.6
TPM3P06753 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM3P06753 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM3P06753 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TPM3P06753 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 IQCB2P-201ENST00000401788 1633 ntBASIC5.03□□□□□ -1.6
TPM3P06753 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 NXPH1-205ENST00000602349 1953 ntBASIC5.03□□□□□ -1.6
TPM3P06753 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM3P06753 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TPM3P06753 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM3P06753 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TPM3P06753 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM3P06753 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM3P06753 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM3P06753 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM3P06753 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM3P06753 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM3P06753 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM3P06753 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms