Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC079075.1-201ENST00000559543 878 ntBASIC4.29□□□□□ -1.72
P04436 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.29□□□□□ -1.72
P04436 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.29□□□□□ -1.72
P04436 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.29□□□□□ -1.72
P04436 HMGB1P51-201ENST00000605166 638 ntBASIC4.29□□□□□ -1.72
P04436 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.29□□□□□ -1.72
P04436 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
P04436 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.29□□□□□ -1.72
P04436 TMEM30CP-203ENST00000637814 1035 ntBASIC4.29□□□□□ -1.72
P04436 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 AL450326.2-201ENST00000421913 1962 ntBASIC4.29□□□□□ -1.72
P04436 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
P04436 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P04436 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.29□□□□□ -1.72
P04436 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
P04436 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.28□□□□□ -1.72
P04436 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
P04436 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
P04436 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
P04436 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
P04436 MTCO1P8-201ENST00000416914 1523 ntBASIC4.28□□□□□ -1.72
P04436 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
P04436 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 RNU6-178P-201ENST00000384631 104 ntBASIC4.28□□□□□ -1.72
P04436 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
P04436 AL049697.2-201ENST00000403708 294 ntBASIC4.28□□□□□ -1.72
P04436 AP000580.1-201ENST00000404439 358 ntBASIC4.28□□□□□ -1.72
P04436 TMBIM7P-201ENST00000418074 855 ntBASIC4.28□□□□□ -1.72
P04436 BTF3P9-201ENST00000418784 283 ntBASIC4.28□□□□□ -1.72
P04436 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.28□□□□□ -1.72
P04436 AC099336.2-201ENST00000422457 254 ntBASIC4.28□□□□□ -1.72
P04436 AC006065.1-201ENST00000422539 802 ntBASIC4.28□□□□□ -1.72
P04436 AC009480.2-201ENST00000422916 432 ntBASIC4.28□□□□□ -1.72
P04436 EIF4HP2-201ENST00000424380 563 ntBASIC4.28□□□□□ -1.72
P04436 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 AC068287.1-201ENST00000430283 295 ntBASIC4.28□□□□□ -1.72
P04436 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
P04436 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 CACYBPP1-201ENST00000438592 684 ntBASIC4.28□□□□□ -1.72
P04436 GTF3AP5-201ENST00000442645 697 ntBASIC4.28□□□□□ -1.72
P04436 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.28□□□□□ -1.72
P04436 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.28□□□□□ -1.72
P04436 AC099560.2-201ENST00000457554 255 ntBASIC4.28□□□□□ -1.72
P04436 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.28□□□□□ -1.72
P04436 AC104629.2-201ENST00000468627 598 ntBASIC4.28□□□□□ -1.72
P04436 OR52A4P-203ENST00000498233 1014 ntBASIC4.28□□□□□ -1.72
P04436 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.28□□□□□ -1.72
P04436 AK3P4-201ENST00000504283 583 ntBASIC4.28□□□□□ -1.72
P04436 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.28□□□□□ -1.72
P04436 AC098799.3-201ENST00000506095 438 ntBASIC4.28□□□□□ -1.72
P04436 AC111000.3-201ENST00000508057 576 ntBASIC4.28□□□□□ -1.72
P04436 SNORA70.17-201ENST00000516449 133 ntBASIC4.28□□□□□ -1.72
P04436 MTCYBP19-201ENST00000517463 1124 ntBASIC4.28□□□□□ -1.72
P04436 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 OR7E10P-201ENST00000526420 991 ntBASIC4.28□□□□□ -1.72
P04436 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 HIGD1AP5-201ENST00000529959 259 ntBASIC4.28□□□□□ -1.72
P04436 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.28□□□□□ -1.72
P04436 FKBP1BP1-201ENST00000553366 325 ntBASIC4.28□□□□□ -1.72
P04436 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.28□□□□□ -1.72
P04436 AC069061.3-201ENST00000582254 823 ntBASIC4.28□□□□□ -1.72
P04436 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 AC068790.7-201ENST00000602347 528 ntBASIC4.28□□□□□ -1.72
P04436 AC093765.1-201ENST00000603758 881 ntBASIC4.28□□□□□ -1.72
P04436 AL133338.2-201ENST00000604292 736 ntBASIC4.28□□□□□ -1.72
P04436 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 AC005021.1-201ENST00000608730 355 ntBASIC4.28□□□□□ -1.72
P04436 RPL23AP61-201ENST00000623642 466 ntBASIC4.28□□□□□ -1.72
P04436 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
P04436 AC073869.10-201ENST00000642016 354 ntBASIC4.28□□□□□ -1.72
P04436 MFSD8-242ENST00000641690 4199 ntBASIC4.28□□□□□ -1.72
P04436 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
P04436 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
P04436 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 CASC19-206ENST00000641028 1430 ntBASIC4.28□□□□□ -1.72
P04436 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P04436 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.28□□□□□ -1.72
P04436 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
P04436 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.28□□□□□ -1.72
P04436 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.27□□□□□ -1.73
P04436 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P04436 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
P04436 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P04436 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.27□□□□□ -1.73
P04436 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P04436 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms