Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AL157385.1-201ENST00000446973 268 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 MTND6P32-201ENST00000457611 483 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 AC025164.1-201ENST00000496249 478 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC106806.2-201ENST00000509365 500 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA1P02708 IGLVIV-65-201ENST00000517313 360 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA1P02708 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA1P02708 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC103792.1-201ENST00000603591 919 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC112198.2-201ENST00000426589 6996 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CHRNA1P02708 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA1P02708 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CHRNA1P02708 AC000374.1-201ENST00000434698 1745 ntBASIC5.06□□□□□ -1.6
CHRNA1P02708 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AL031119.1-201ENST00000404707 1879 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 RNA5SP515-201ENST00000364570 118 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRNA1P02708 OR6C69P-201ENST00000394268 893 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 E2F6P2-201ENST00000420708 748 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRNA1P02708 MTCO1P51-201ENST00000427672 1060 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC020898.1-201ENST00000474167 787 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA1P02708 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC010476.1-201ENST00000519111 851 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC138701.1-201ENST00000524329 714 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC087477.6-201ENST00000559595 843 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA1P02708 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC114781.5-201ENST00000615297 108 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 AC011815.3-201ENST00000624194 473 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 AC135352.1-201ENST00000506173 1418 ntBASIC5.05□□□□□ -1.6
CHRNA1P02708 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA1P02708 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA1P02708 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA1P02708 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNA1P02708 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHRNA1P02708 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 DDX18P5-201ENST00000534547 1306 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 OR4K17-201ENST00000315543 1032 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 RN7SKP227-201ENST00000364445 330 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHRNA1P02708 ST13P16-201ENST00000401760 781 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 MIR1193-201ENST00000408109 78 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 TMSB10P2-201ENST00000416049 131 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 TMBIM7P-201ENST00000418074 855 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AL590609.2-201ENST00000421430 368 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNA1P02708 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AP001324.1-201ENST00000428553 399 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 RPS29P17-201ENST00000430795 166 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AC092447.2-201ENST00000435487 669 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 RPL23AP93-201ENST00000440847 484 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 HMGN1P8-201ENST00000463578 288 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 RPS27AP16-201ENST00000492222 470 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms