Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SOCS5P3-201ENST00000425115 1576 ntBASIC5.59□□□□□ -1.52
CNOT4O95628 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNOT4O95628 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC107027.3-201ENST00000565095 3473 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 AC016716.1-201ENST00000265882 708 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNOT4O95628 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 RNU6-707P-201ENST00000364647 95 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 OR1L1-202ENST00000373686 1083 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 RPS15AP38-201ENST00000413110 372 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 TCEA1P4-201ENST00000415066 844 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 CCDC58P2-201ENST00000417131 366 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC004448.2-201ENST00000422360 586 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 CYCSP46-201ENST00000423569 204 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 ISCA1P1-201ENST00000426679 387 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 MTCO1P3-201ENST00000429327 192 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC112492.2-201ENST00000432774 1030 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC094019.1-201ENST00000434678 472 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC098614.3-201ENST00000438957 440 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 ELOCP10-201ENST00000440624 327 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 CXCR2P1-202ENST00000443392 1074 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNOT4O95628 AL589765.3-201ENST00000446084 462 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 WASF1P1-201ENST00000447560 1131 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 OR4G11P-201ENST00000492842 939 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 CCDC11P1-201ENST00000503137 1162 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC025881.1-201ENST00000518851 512 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CNOT4O95628 AP001207.1-201ENST00000524051 481 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 KCTD9P4-201ENST00000526766 1166 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 AC010487.1-201ENST00000594408 1172 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 AP001267.4-201ENST00000602598 545 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC103881.1-201ENST00000603476 538 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 ELOCP34-201ENST00000604436 327 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC004067.1-201ENST00000608733 700 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 U4.5-201ENST00000617137 123 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 AC104985.2-201ENST00000620598 500 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.58□□□□□ -1.52
CNOT4O95628 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CNOT4O95628 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.58□□□□□ -1.52
CNOT4O95628 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 AC009229.4-201ENST00000623854 1947 ntBASIC5.58□□□□□ -1.52
CNOT4O95628 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNOT4O95628 AC090017.1-201ENST00000548612 1779 ntBASIC5.57□□□□□ -1.52
CNOT4O95628 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CNOT4O95628 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.57□□□□□ -1.52
CNOT4O95628 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.57□□□□□ -1.52
CNOT4O95628 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CNOT4O95628 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.57□□□□□ -1.52
CNOT4O95628 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNOT4O95628 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CNOT4O95628 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNOT4O95628 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNOT4O95628 RNA5SP478-201ENST00000364657 115 ntBASIC5.57□□□□□ -1.52
CNOT4O95628 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CNOT4O95628 AC004386.1-201ENST00000393214 761 ntBASIC5.57□□□□□ -1.52
CNOT4O95628 HMGB3P18-201ENST00000406327 590 ntBASIC5.57□□□□□ -1.52
CNOT4O95628 U3.43-201ENST00000410734 213 ntBASIC5.57□□□□□ -1.52
CNOT4O95628 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.57□□□□□ -1.52
CNOT4O95628 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.57□□□□□ -1.52
CNOT4O95628 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNOT4O95628 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.57□□□□□ -1.52
CNOT4O95628 AC007435.1-201ENST00000421086 415 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms