Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AL031595.2-201ENST00000624215 19071 ntBASIC4.79□□□□□ -1.64
CEP290O15078 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CEP290O15078 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CEP290O15078 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.79□□□□□ -1.64
CEP290O15078 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CEP290O15078 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.79□□□□□ -1.64
CEP290O15078 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CEP290O15078 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.79□□□□□ -1.64
CEP290O15078 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.79□□□□□ -1.64
CEP290O15078 MIR5685-201ENST00000579080 79 ntBASIC4.79□□□□□ -1.64
CEP290O15078 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
CEP290O15078 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.78□□□□□ -1.64
CEP290O15078 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CEP290O15078 MIR331-201ENST00000362302 94 ntBASIC4.78□□□□□ -1.64
CEP290O15078 RN7SKP284-201ENST00000411002 343 ntBASIC4.78□□□□□ -1.64
CEP290O15078 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.78□□□□□ -1.64
CEP290O15078 AC091286.1-201ENST00000431233 461 ntBASIC4.78□□□□□ -1.64
CEP290O15078 AC115115.1-201ENST00000449927 248 ntBASIC4.78□□□□□ -1.64
CEP290O15078 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.78□□□□□ -1.64
CEP290O15078 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.78□□□□□ -1.64
CEP290O15078 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.78□□□□□ -1.64
CEP290O15078 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
CEP290O15078 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.78□□□□□ -1.64
CEP290O15078 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.78□□□□□ -1.64
CEP290O15078 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CEP290O15078 AL031119.1-201ENST00000404707 1879 ntBASIC4.78□□□□□ -1.64
CEP290O15078 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.78□□□□□ -1.64
CEP290O15078 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 AC046176.1-201ENST00000435260 1170 ntBASIC4.78□□□□□ -1.64
CEP290O15078 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CEP290O15078 CDH12P2-201ENST00000504393 298 ntBASIC4.78□□□□□ -1.64
CEP290O15078 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.78□□□□□ -1.64
CEP290O15078 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.78□□□□□ -1.64
CEP290O15078 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.77□□□□□ -1.65
CEP290O15078 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CEP290O15078 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CEP290O15078 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.77□□□□□ -1.65
CEP290O15078 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CEP290O15078 AP000357.1-201ENST00000409926 1165 ntBASIC4.77□□□□□ -1.65
CEP290O15078 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.77□□□□□ -1.65
CEP290O15078 RN7SL429P-201ENST00000479090 223 ntBASIC4.77□□□□□ -1.65
CEP290O15078 RN7SL489P-201ENST00000486185 223 ntBASIC4.77□□□□□ -1.65
CEP290O15078 RN7SL327P-201ENST00000488659 223 ntBASIC4.77□□□□□ -1.65
CEP290O15078 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.77□□□□□ -1.65
CEP290O15078 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.77□□□□□ -1.65
CEP290O15078 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.77□□□□□ -1.65
CEP290O15078 RN7SL853P-201ENST00000617250 223 ntBASIC4.77□□□□□ -1.65
CEP290O15078 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.77□□□□□ -1.65
CEP290O15078 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.77□□□□□ -1.65
CEP290O15078 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CEP290O15078 AC073342.2-201ENST00000595842 1800 ntBASIC4.77□□□□□ -1.65
CEP290O15078 AP001157.1-201ENST00000550837 2339 ntBASIC4.77□□□□□ -1.65
CEP290O15078 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.77□□□□□ -1.65
CEP290O15078 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.77□□□□□ -1.65
CEP290O15078 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CEP290O15078 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CEP290O15078 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CEP290O15078 AL133244.1-201ENST00000456007 258 ntBASIC4.77□□□□□ -1.65
CEP290O15078 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.77□□□□□ -1.65
CEP290O15078 Y_RNA.719-201ENST00000517156 106 ntBASIC4.77□□□□□ -1.65
CEP290O15078 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.77□□□□□ -1.65
CEP290O15078 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.77□□□□□ -1.65
CEP290O15078 MIR6500-201ENST00000622700 86 ntBASIC4.77□□□□□ -1.65
CEP290O15078 AC008079.2-201ENST00000623543 20396 ntBASIC4.76□□□□□ -1.65
CEP290O15078 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.76□□□□□ -1.65
CEP290O15078 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
CEP290O15078 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CEP290O15078 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 RN7SKP235-201ENST00000410662 305 ntBASIC4.76□□□□□ -1.65
CEP290O15078 VN1R37P-201ENST00000419096 748 ntBASIC4.76□□□□□ -1.65
CEP290O15078 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.76□□□□□ -1.65
CEP290O15078 AC090142.1-201ENST00000465776 462 ntBASIC4.76□□□□□ -1.65
CEP290O15078 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.76□□□□□ -1.65
CEP290O15078 MIR4513-201ENST00000581077 86 ntBASIC4.76□□□□□ -1.65
CEP290O15078 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.76□□□□□ -1.65
CEP290O15078 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
CEP290O15078 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.76□□□□□ -1.65
CEP290O15078 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.76□□□□□ -1.65
CEP290O15078 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
CEP290O15078 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CEP290O15078 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.76□□□□□ -1.65
CEP290O15078 MIR1289-1-201ENST00000408836 144 ntBASIC4.75□□□□□ -1.65
CEP290O15078 NPM1P26-201ENST00000426339 738 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms