Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN4O14493 AC040958.1-201ENST00000561102 201 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN4O14493 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN4O14493 AC127024.5-201ENST00000580085 462 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN4O14493 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 AC124856.1-201ENST00000600819 896 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN4O14493 AP005432.2-201ENST00000608162 586 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 MIR8084-201ENST00000614105 89 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 AC006249.1-201ENST00000621223 471 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 AC093311.1-201ENST00000506586 2021 ntBASIC4.75□□□□□ -1.65
CLDN4O14493 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN4O14493 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDN4O14493 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN4O14493 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC015813.6-201ENST00000624409 5808 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 AC017079.1-201ENST00000333650 415 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 RNU4-4P-201ENST00000364588 130 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 AL158050.1-201ENST00000416077 457 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 LINC01347-201ENST00000417964 355 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 MTCO2P1-201ENST00000424648 477 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 MTCO3P21-201ENST00000430791 643 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC097499.1-201ENST00000444277 208 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AL137845.2-201ENST00000444292 988 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 RPL10P17-201ENST00000453852 316 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 RN7SL319P-201ENST00000480656 221 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 NIP7P2-201ENST00000485801 544 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 MYL12BP2-201ENST00000503948 512 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN4O14493 AP000676.2-201ENST00000529711 301 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN4O14493 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 AL137072.1-201ENST00000603444 466 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AC005014.3-201ENST00000605985 190 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AC133644.2-201ENST00000608142 540 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 AP001784.1-201ENST00000624107 428 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 AC024023.1-201ENST00000624530 922 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 FRG1EP-201ENST00000634469 770 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.74□□□□□ -1.65
CLDN4O14493 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN4O14493 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLDN4O14493 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN4O14493 AC007996.1-201ENST00000620414 2821 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CLDN4O14493 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN4O14493 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLDN4O14493 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN4O14493 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN4O14493 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN4O14493 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLDN4O14493 LINC01881-201ENST00000416103 412 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 PNRC2P1-201ENST00000423940 420 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 AC092017.2-201ENST00000427600 362 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN4O14493 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN4O14493 AC006466.1-201ENST00000438721 289 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 RPS29P9-201ENST00000440360 171 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 TXNP5-201ENST00000441043 315 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN4O14493 MOB1AP2-201ENST00000446060 614 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN4O14493 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN4O14493 IGHV5-78-201ENST00000450948 295 ntBASIC4.73□□□□□ -1.65
CLDN4O14493 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms