Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 SNORA17.1-201ENST00000362945 126 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RNU6-452P-201ENST00000384406 107 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RNU6-906P-201ENST00000384700 70 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 SNORD65C-201ENST00000390962 71 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL034374.1-201ENST00000406329 351 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AP000357.1-201ENST00000409926 1165 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC092638.1-201ENST00000411966 1275 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 NPM1P4-201ENST00000414095 812 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL121878.1-201ENST00000418638 859 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 SETP9-201ENST00000423837 832 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL121776.1-201ENST00000429337 372 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 PTGES3P1-201ENST00000439531 483 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 Z73417.1-201ENST00000447373 778 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL050341.1-201ENST00000447743 313 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC107015.1-201ENST00000466902 747 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC037198.2-201ENST00000478845 733 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RPS21P4-201ENST00000487122 248 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RPL7P51-201ENST00000490532 749 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RNA5SP249-201ENST00000516127 99 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 CYCSP40-201ENST00000575927 294 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC095055.1-201ENST00000603472 1113 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC104687.2-201ENST00000604442 342 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 PART1_2.1-201ENST00000612397 250 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL049767.1-202ENST00000637826 242 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC007996.1-201ENST00000620414 2821 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AL672167.1-205ENST00000641112 3080 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 SNORA73.1-201ENST00000363107 205 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC005522.1-201ENST00000395416 346 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 DNAJC19P6-201ENST00000401853 280 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC002069.1-201ENST00000429649 1159 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 GTF2IP3-201ENST00000433887 494 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 RHOT1P3-201ENST00000436571 331 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 MTND1P31-201ENST00000449206 961 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC092155.2-201ENST00000454675 477 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC104109.1-201ENST00000498563 436 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC112673.1-201ENST00000513168 575 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 MTND2P38-201ENST00000522536 667 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 IGKV2-18-201ENST00000522607 343 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 IGKV3D-34-201ENST00000522638 302 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 NDUFS5P6-201ENST00000529136 295 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LRRC6P1-201ENST00000532188 885 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 BNIP3P1-201ENST00000547295 580 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms