Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 Y_RNA.302-201ENST00000364997 102 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 RNA5SP485-201ENST00000365053 119 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 SNORD94-201ENST00000386037 137 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 CIR1P3-201ENST00000405137 479 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 METTL15P3-201ENST00000415522 1221 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PTP4A1P1-201ENST00000420539 515 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 BX276092.6-201ENST00000430476 250 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC099670.2-201ENST00000435130 321 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PA2G4P6-201ENST00000438325 1197 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL512286.1-201ENST00000439244 400 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 ARL5AP2-201ENST00000444698 533 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 REG1CP-206ENST00000447469 496 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 NFU1P2-201ENST00000448700 469 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 RPL36AP55-201ENST00000454114 305 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 BX276092.8-201ENST00000455722 250 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 RPS4XP12-201ENST00000461747 709 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL672167.3-201ENST00000465951 960 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AP003385.3-201ENST00000472498 287 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 RPS3AP17-201ENST00000472594 777 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 MTND6P6-201ENST00000478031 263 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 GAPDHP39-201ENST00000481866 979 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 ACTG1P13-201ENST00000486987 1043 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 HMGB1P44-201ENST00000508597 572 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 MAST4-IT1-201ENST00000514241 658 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC083923.1-201ENST00000523708 376 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC023310.2-201ENST00000553844 547 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 GTF2IP22-201ENST00000554443 182 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 NIFKP8-201ENST00000560500 874 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC027796.1-201ENST00000575593 512 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC063977.7-201ENST00000594454 337 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC009994.1-201ENST00000606889 253 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC010133.1-201ENST00000615809 842 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC096861.1-201ENST00000616652 240 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC104260.1-201ENST00000616660 539 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 STMN1P1-201ENST00000617809 440 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 CLUHP10-201ENST00000631979 980 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 AC109446.4-201ENST00000623235 2755 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PABPC1P9-201ENST00000426076 1612 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CAPN6Q9Y6Q1 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 CR383658.2-201ENST00000547576 1525 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 AC217777.1-201ENST00000570034 1471 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 AC008033.1-201ENST00000216407 1162 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 RNU5F-7P-201ENST00000363696 115 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 MIR431-201ENST00000385266 114 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 CYCSP45-201ENST00000402289 315 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 ZNF37CP-201ENST00000406795 241 ntBASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.3□□□□□ -1.4
CAPN6Q9Y6Q1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms