Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 CYCSP11-201ENST00000436426 315 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 AL138878.2-201ENST00000440581 1241 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AL353898.1-201ENST00000444055 238 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC063943.1-201ENST00000465434 453 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 RPL21P6-201ENST00000479171 504 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 RN7SL459P-201ENST00000481078 302 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 MTCYBP19-201ENST00000517463 1124 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 NMNAT1P1-201ENST00000554095 876 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 MIR4737-201ENST00000583979 81 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC234771.5-201ENST00000600161 514 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 MIR378J-201ENST00000611988 109 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.53□□□□□ -1.68
RNF6Q9Y252 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF6Q9Y252 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF6Q9Y252 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
RNF6Q9Y252 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.53□□□□□ -1.69
RNF6Q9Y252 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 SDAD1P1-202ENST00000524156 2051 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL359922.3-201ENST00000624779 1670 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 SNORA77-201ENST00000408716 125 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RAB28P1-201ENST00000411517 641 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL512504.1-201ENST00000415494 778 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC019050.1-201ENST00000418508 492 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 BTF3P9-201ENST00000418784 283 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 OR6K4P-201ENST00000423179 955 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC114878.1-201ENST00000441166 358 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 Z99127.2-201ENST00000441426 334 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC011753.3-201ENST00000443436 406 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RPL21P133-201ENST00000443666 476 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL137845.2-201ENST00000444292 988 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL627224.1-201ENST00000448334 444 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC002553.2-201ENST00000453217 340 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 MTND3P4-201ENST00000453537 303 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC005008.1-201ENST00000456151 612 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RN7SL319P-201ENST00000480656 221 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC021146.7-201ENST00000509604 775 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC034244.2-201ENST00000514668 858 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RNA5SP43-201ENST00000516559 110 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RAB9BP1-201ENST00000519581 626 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC012339.2-201ENST00000523996 453 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 SULT1C2P2-201ENST00000562517 294 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 RN7SL176P-201ENST00000580352 264 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC068020.1-201ENST00000594215 661 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC104687.2-201ENST00000604442 342 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC145207.9-201ENST00000623802 325 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 AC104820.1-201ENST00000624183 307 ntBASIC4.52□□□□□ -1.69
RNF6Q9Y252 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF6Q9Y252 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF6Q9Y252 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF6Q9Y252 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNF6Q9Y252 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF6Q9Y252 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF6Q9Y252 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF6Q9Y252 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF6Q9Y252 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF6Q9Y252 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms