Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 KCTD9P4-201ENST00000526766 1166 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 MIR548AB-201ENST00000584917 84 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC007687.1-201ENST00000602704 304 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC113194.1-201ENST00000606037 500 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 RMST_10.1-201ENST00000616309 154 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AL158801.5-201ENST00000623123 465 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 MIR1321-201ENST00000637766 79 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 AC011504.1-201ENST00000623331 4103 ntBASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PDZRN3Q9UPQ7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 UGT2B26P-201ENST00000508672 1613 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.62-201ENST00000362840 99 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-1222P-201ENST00000384615 107 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RN7SKP206-201ENST00000410823 293 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RPL7P56-201ENST00000429441 717 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RPL12P16-201ENST00000431098 498 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RPL35AP19-201ENST00000469425 329 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 EIF3LP3-201ENST00000495197 822 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 H3F3AP3-201ENST00000497682 407 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 LSM3P4-201ENST00000502948 309 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC010587.1-201ENST00000505809 469 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC083906.1-201ENST00000509298 406 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.704-201ENST00000516851 102 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-1271P-201ENST00000517049 105 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 IGLV3-6-201ENST00000523937 250 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AP001893.2-201ENST00000526949 202 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 BNIP3P23-201ENST00000599655 511 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AL096712.1-201ENST00000614561 159 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC137590.2-201ENST00000619709 240 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC018816.2-201ENST00000621460 353 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC005332.9-201ENST00000620266 2921 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 MTND5P27-201ENST00000428871 1720 ntBASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.29□□□□□ -1.08
PDZRN3Q9UPQ7 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 OR10AB1P-202ENST00000641219 1686 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 CASC19-228ENST00000641414 1684 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 RN7SKP296-201ENST00000411185 341 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 HMGB3P23-201ENST00000414981 585 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 ARAFP1-201ENST00000422172 605 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AL354707.3-201ENST00000427308 331 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 MTCYBP9-201ENST00000431021 303 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 OR52B5P-201ENST00000435337 951 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 SNRPGP6-201ENST00000451124 220 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 Z82190.1-201ENST00000454534 490 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 MTCO3P11-201ENST00000455103 774 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 RN7SL214P-201ENST00000487317 265 ntBASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.28□□□□□ -1.08
PDZRN3Q9UPQ7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms