Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX3Q9UBR4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC093775.1-201ENST00000624154 1868 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 SNORA56-201ENST00000383966 129 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC022022.1-201ENST00000430304 178 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL935212.3-201ENST00000450729 284 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC096741.1-201ENST00000472250 846 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 RN7SL205P-201ENST00000490174 284 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC069304.1-201ENST00000491593 704 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC021146.7-201ENST00000509604 775 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC108157.1-201ENST00000510511 539 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC020937.1-201ENST00000519677 1013 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 CR383656.6-201ENST00000550518 394 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 RN7SL52P-201ENST00000584271 284 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 RN7SL435P-201ENST00000584418 282 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC008745.1-201ENST00000604064 271 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AL118508.4-201ENST00000624142 1176 ntBASIC4.66□□□□□ -1.66
LHX3Q9UBR4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX3Q9UBR4 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.66
LHX3Q9UBR4 AL592148.3-201ENST00000608771 2646 ntBASIC4.65□□□□□ -1.66
LHX3Q9UBR4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX3Q9UBR4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX3Q9UBR4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.65□□□□□ -1.66
LHX3Q9UBR4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX3Q9UBR4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 GLULP6-201ENST00000399502 913 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RPS3AP23-201ENST00000401762 784 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 OR1F12-201ENST00000402365 945 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 OR6K4P-201ENST00000423179 955 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RPL21P43-201ENST00000425440 472 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RPEP3-201ENST00000425462 676 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RPL23AP1-201ENST00000428990 471 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 CEACAMP9-201ENST00000442990 513 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RN7SL459P-201ENST00000481078 302 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC079075.1-201ENST00000559543 878 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC068790.4-201ENST00000602474 263 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC005520.3-201ENST00000602874 370 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AL133247.2-201ENST00000603236 482 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AC100847.1-201ENST00000611316 481 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 RPL23AP61-201ENST00000623642 466 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 OR5AC4P-202ENST00000642086 985 ntBASIC4.65□□□□□ -1.67
LHX3Q9UBR4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LHX3Q9UBR4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms