Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AP002371.1-201ENST00000463604 433 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC092905.1-201ENST00000467527 949 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 TRBV8-1-201ENST00000481590 279 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 ARL4AP1-201ENST00000503220 705 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC008147.3-201ENST00000548666 354 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC008759.1-201ENST00000589783 983 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL713998.2-201ENST00000604538 1198 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL049539.1-201ENST00000611964 459 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 MIR6891-201ENST00000618788 93 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 OR2L1P-202ENST00000641567 1023 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 MAPK10-320ENST00000641462 6696 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC139713.2-215ENST00000641428 5037 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 RNA5SP22-201ENST00000365393 109 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 HDGFP1-201ENST00000405943 252 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC099063.2-201ENST00000446360 662 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 DDX39BP2-208ENST00000453923 258 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC012158.1-204ENST00000483430 465 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AP001781.1-201ENST00000530977 207 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 MIR4480-201ENST00000582492 71 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 BMS1P21-201ENST00000634565 365 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 AL592182.3-201ENST00000642132 3304 ntBASIC4.49□□□□□ -1.69
TREX1Q9NSU2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
TREX1Q9NSU2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC092435.4-201ENST00000623012 4159 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 NOL8P1-201ENST00000508336 3529 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 OR52B1P-201ENST00000316506 909 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 RPL5P19-201ENST00000404228 893 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AL078604.1-201ENST00000404609 466 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 RPL21P108-201ENST00000413857 481 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC010740.1-201ENST00000417035 684 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 UBTFL3-201ENST00000418934 1024 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 ARAFP1-201ENST00000422172 605 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 APOOP2-201ENST00000461561 539 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 UBTFL6-201ENST00000477929 1024 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms