Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AC091946.2-201ENST00000606105 291 ntBASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AC245297.2-201ENST00000610119 565 ntBASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AC022400.9-201ENST00000623633 273 ntBASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AC232271.1-201ENST00000602455 2715 ntBASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM39Q9HCM9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 CDR1-202ENST00000625883 1485 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AP005435.3-201ENST00000531260 3198 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RNU6-582P-201ENST00000362989 107 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RNU6-492P-201ENST00000363035 104 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 SUGT1P1-201ENST00000379514 476 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 SNORA26.8-201ENST00000391306 124 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL139098.1-201ENST00000407291 389 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MIR1282-201ENST00000408865 101 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RNU2-6P-201ENST00000411404 190 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 Z99497.1-201ENST00000421282 135 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MRPS21P2-201ENST00000424704 264 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC008072.1-201ENST00000434254 824 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL731534.1-201ENST00000434711 269 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 BMS1P10-201ENST00000443754 1120 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 SDC4P-201ENST00000453285 601 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC104164.1-201ENST00000460282 590 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RPL21P6-201ENST00000479171 504 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC008629.2-201ENST00000503783 483 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC010424.1-201ENST00000506336 297 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RNA5SP438-201ENST00000516561 112 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC060775.1-201ENST00000518241 520 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 HIGD1AP10-201ENST00000527837 282 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC091488.1-201ENST00000604239 660 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL365181.4-201ENST00000609800 547 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC007204.2-201ENST00000615022 616 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 PCMTD1P7-201ENST00000634506 357 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AP000550.3-201ENST00000637734 379 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 MKKS-204ENST00000639674 192 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 THAP12P9-201ENST00000503971 2360 ntBASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM39Q9HCM9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 PWAR1-201ENST00000624188 2414 ntBASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 SELENOWP1-201ENST00000322792 252 ntBASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 RN7SKP128-201ENST00000364270 303 ntBASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 Y_RNA.559-201ENST00000384686 107 ntBASIC5.9□□□□□ -1.46
TRIM39Q9HCM9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms