Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC134882.1-201ENST00000603738 1676 ntBASIC4.99□□□□□ -1.61
BRF2Q9HAW0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC017079.1-201ENST00000333650 415 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RNA5SP183-201ENST00000362452 119 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RNU5B-1-201ENST00000363286 116 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RNA5SP132-201ENST00000364725 118 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 SNORA51.12-201ENST00000384448 134 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RNU6-298P-201ENST00000390888 96 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AL603865.2-201ENST00000401679 213 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AL390316.1-201ENST00000406279 553 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC009263.1-201ENST00000441193 1239 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RPS7P5-201ENST00000441482 581 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 SPRYD7P1-201ENST00000443861 570 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 OR51B8P-201ENST00000449892 769 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RPS26P41-201ENST00000450370 284 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC108161.1-201ENST00000461060 402 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC006511.1-201ENST00000470614 315 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RN7SL184P-201ENST00000488308 297 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 RPS4XP20-201ENST00000505751 772 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 GTF2F2P1-201ENST00000511083 675 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AL671862.1-201ENST00000515851 349 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC069307.1-201ENST00000602820 447 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 NTAN1P1-201ENST00000603150 646 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC123768.4-201ENST00000616244 701 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AC108359.1-201ENST00000616451 1211 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 ATE1-AS1-202ENST00000636460 506 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 AL590396.4-201ENST00000636779 956 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 LINC01808-202ENST00000641680 1116 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 CASC19-221ENST00000641309 1382 ntBASIC4.98□□□□□ -1.61
BRF2Q9HAW0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
BRF2Q9HAW0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 SNORD65C-201ENST00000390962 71 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL590609.2-201ENST00000421430 368 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 ELOCP6-201ENST00000429066 328 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC002069.1-201ENST00000429649 1159 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 YWHAEP5-201ENST00000431545 765 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC000041.1-201ENST00000439655 175 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL592437.1-201ENST00000443781 492 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 Z92846.1-201ENST00000456203 268 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC245028.2-201ENST00000458673 253 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 ELOCP12-201ENST00000458706 328 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 COX6B1P2-201ENST00000489624 230 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL136038.1-201ENST00000497246 351 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AL035404.1-201ENST00000497982 568 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 AC107918.3-201ENST00000533272 382 ntBASIC4.97□□□□□ -1.61
BRF2Q9HAW0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRF2Q9HAW0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms