Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 HCFC2P1-201ENST00000392864 1592 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 RNA5SP388-201ENST00000362584 119 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 SNORA2.3-201ENST00000383920 135 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 NPM1P39-201ENST00000449818 867 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 AL513533.1-201ENST00000453728 415 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC034236.1-201ENST00000469891 373 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 RN7SL441P-201ENST00000492388 296 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 ENPP7P9-201ENST00000514456 627 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 RNA5SP497-201ENST00000516081 97 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 MIR4675-201ENST00000577898 77 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 AC005086.4-201ENST00000623065 213 ntBASIC4.79□□□□□ -1.64
TRIM4Q9C037 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM4Q9C037 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM4Q9C037 NR1H5P-201ENST00000452683 1377 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 OR4G1P-202ENST00000641173 1788 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 IGKV7-3-201ENST00000357453 298 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 RNU1-20P-201ENST00000363314 162 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 EIF4A1P3-201ENST00000411521 244 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 COX6CP13-201ENST00000428703 226 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 NMNAT1P2-201ENST00000435192 860 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 NDUFA5P8-201ENST00000449019 346 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC006967.1-201ENST00000467608 589 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 HMGN2P25-201ENST00000486956 268 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC140172.1-201ENST00000502928 141 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 RN7SKP122-201ENST00000515923 296 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 RPL23AP53-201ENST00000521854 457 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC116553.2-201ENST00000564203 463 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC091042.1-201ENST00000579213 173 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AL034374.2-201ENST00000605281 548 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC140113.4-201ENST00000622087 222 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM4Q9C037 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM4Q9C037 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.78□□□□□ -1.64
TRIM4Q9C037 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 SDAD1P1-202ENST00000524156 2051 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 HSPD1P16-201ENST00000402302 394 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 CHIAP3-201ENST00000423668 1133 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 CENPIP1-201ENST00000425713 902 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 RHEBP2-201ENST00000450289 600 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AC097484.1-201ENST00000471148 389 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms