Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-488P-201ENST00000515918 99 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC073544.2-201ENST00000601155 540 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 SMIM12P1-201ENST00000603004 274 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL135999.3-201ENST00000610501 812 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 MIR7854-201ENST00000620068 65 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC092192.1-201ENST00000633154 1018 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC090582.1-201ENST00000636321 199 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC020656.2-201ENST00000613291 5309 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 USP9YP4-201ENST00000424401 1745 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 KARSP3-201ENST00000571212 1504 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 AC093671.1-201ENST00000624981 2929 ntBASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM55Q9BYV6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RPL11P4-201ENST00000332269 436 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RNU6-249P-201ENST00000363016 102 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RNU6-251P-201ENST00000363235 104 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RNU6-216P-201ENST00000363282 104 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 U3.23-201ENST00000391132 200 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 VDAC2P1-201ENST00000399358 958 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL121978.1-201ENST00000402778 359 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AP000534.2-201ENST00000412729 568 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL354868.1-201ENST00000417077 482 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL049610.1-201ENST00000423374 372 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC099782.1-201ENST00000425889 474 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL354707.3-201ENST00000427308 331 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC108479.1-201ENST00000431142 427 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC242426.1-201ENST00000435270 960 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 VN1R110P-201ENST00000438988 971 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 KATNBL1P6-201ENST00000453433 915 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RPL18AP17-201ENST00000455326 198 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 NDUFA12P1-201ENST00000455914 406 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 Z83838.1-202ENST00000456225 839 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC006511.1-201ENST00000470614 315 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 KRT19P6-201ENST00000510983 209 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC091965.2-201ENST00000512324 613 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MTCO2P32-201ENST00000514865 403 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RPA2P3-201ENST00000533268 770 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 SERPINE4P-201ENST00000554978 281 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MIR132-201ENST00000591554 101 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 U73023.1-201ENST00000603134 700 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC095055.1-201ENST00000603472 1113 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC069304.2-201ENST00000605154 435 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL353600.1-201ENST00000608148 251 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC024560.3-201ENST00000608482 349 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC006924.1-201ENST00000610750 559 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC026585.1-201ENST00000619582 524 ntBASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms