Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 RNU11-4P-201ENST00000391149 133 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC013429.2-201ENST00000418798 781 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 NPM1P18-201ENST00000434232 732 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC027309.2-201ENST00000520566 192 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AGGF1P9-201ENST00000561884 913 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 LINC00622-201ENST00000562811 1570 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC009779.8-201ENST00000641684 4384 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AL157385.1-201ENST00000446973 268 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC104651.2-201ENST00000447549 528 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AL031985.2-201ENST00000600955 480 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC023762.1-201ENST00000603280 584 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 PTMAP3-201ENST00000447474 330 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RPS4XP15-201ENST00000489210 795 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RNU1-95P-201ENST00000516357 160 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RNU1-128P-201ENST00000516704 160 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC233263.6-201ENST00000631132 1963 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RN7SKP156-201ENST00000410308 342 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AL157831.1-201ENST00000426134 473 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AL512649.1-201ENST00000428997 581 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC090312.1-201ENST00000580637 348 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSMD1Q96PZ7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 WBP1LP4-201ENST00000505043 344 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL354798.1-201ENST00000622505 329 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC015804.1-201ENST00000622935 435 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC015813.6-201ENST00000624409 5808 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL391219.1-201ENST00000422570 483 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 NPM1P26-201ENST00000426339 738 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms