Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 OR8X1P-201ENST00000534542 869 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 BNIP3P33-201ENST00000598912 569 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 SNX6P1-201ENST00000601728 1224 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AC010857.1-201ENST00000606398 594 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AL136370.1-201ENST00000608166 691 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AP001005.3-201ENST00000622049 129 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AC091948.2-201ENST00000636510 279 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AC007342.7-201ENST00000624610 2337 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 AC024341.1-201ENST00000526444 1552 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 MTND4P21-201ENST00000453886 1357 ntBASIC5.04□□□□□ -1.6
NECTIN4Q96NY8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC007618.1-201ENST00000366455 732 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL035079.1-201ENST00000405210 287 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RN7SKP267-201ENST00000410381 285 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 MTCYBP7-201ENST00000419540 1134 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 CR848007.2-201ENST00000424918 787 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 NPM1P26-201ENST00000426339 738 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 NPM1P33-201ENST00000438918 872 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 ARL5AP3-201ENST00000439327 386 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RPS15AP29-201ENST00000445539 400 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 RPL7AP28-201ENST00000464513 571 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC104629.2-201ENST00000468627 598 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC005412.2-201ENST00000492004 341 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC023424.1-201ENST00000496058 459 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 OR7E10P-201ENST00000526420 991 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL109618.2-201ENST00000605527 211 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL121932.1-201ENST00000605542 214 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL133445.2-201ENST00000611191 527 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AL731566.1-201ENST00000620490 1937 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 AC006971.1-201ENST00000407916 4486 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 HSPA8P17-201ENST00000427029 1382 ntBASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN4Q96NY8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RNU1-85P-201ENST00000364127 164 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RNA5SP509-201ENST00000364577 119 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 OR1L6-202ENST00000373684 1044 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RPEP3-201ENST00000425462 676 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RPL23AP4-201ENST00000427757 463 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC000111.2-201ENST00000448200 210 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 NPM1P39-201ENST00000449818 867 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC011276.1-201ENST00000469688 323 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 RN7SL817P-201ENST00000480777 288 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 NPM1P6-201ENST00000521088 871 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC068993.1-201ENST00000546724 589 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 AC012414.2-201ENST00000559474 187 ntBASIC5.02□□□□□ -1.61
NECTIN4Q96NY8 SULT1C2P2-201ENST00000562517 294 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms