Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP002505.2-201ENST00000623585 696 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 CYP4F35P-202ENST00000636121 390 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 OR52B5P-202ENST00000641118 1110 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 SAGE2P-201ENST00000420011 2126 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VMP1Q96GC9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 RNU1-87P-201ENST00000363727 170 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL078599.1-201ENST00000402075 293 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 OR4K12P-201ENST00000406538 961 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AP000357.1-201ENST00000409926 1165 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 MTND2P15-201ENST00000418575 892 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 OR2AH1P-201ENST00000425717 928 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 CNOT7P2-201ENST00000441051 832 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL513321.1-201ENST00000441175 761 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 FAR2P1-206ENST00000449736 709 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL935212.3-201ENST00000450729 284 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL035090.1-201ENST00000454835 332 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC079168.1-201ENST00000458741 345 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC022795.1-201ENST00000473808 480 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC079841.1-201ENST00000481228 950 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 OR52A4P-202ENST00000481634 799 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 IGBP1P4-201ENST00000503202 879 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC006499.3-201ENST00000506077 748 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC103833.1-201ENST00000517442 172 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC093014.1-201ENST00000548926 724 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 OR7E18P-201ENST00000592589 702 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC040174.2-201ENST00000602701 465 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC126915.2-201ENST00000610957 190 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AC244107.2-201ENST00000611773 76 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AP003400.3-201ENST00000624904 346 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL596275.2-204ENST00000641628 552 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL596275.2-206ENST00000641957 626 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 AL136964.1-201ENST00000622038 2990 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 SCARNA15-201ENST00000607520 4325 ntBASIC4.96□□□□□ -1.62
VMP1Q96GC9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VMP1Q96GC9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.96□□□□□ -1.62
VMP1Q96GC9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC011493.1-201ENST00000596753 1632 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 ARL2BPP3-201ENST00000421226 480 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AL139148.1-201ENST00000427122 680 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 BX119904.1-201ENST00000432026 348 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AL645939.1-201ENST00000453429 797 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 MTND2P6-201ENST00000455337 1030 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 RNA5SP464-201ENST00000516251 108 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC025918.2-201ENST00000558683 763 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC079610.2-201ENST00000604818 690 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC006946.3-201ENST00000609791 756 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AL158196.1-201ENST00000616786 434 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AL645927.2-201ENST00000618350 349 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.95□□□□□ -1.62
VMP1Q96GC9 AP000648.2-201ENST00000624182 404 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 AC067931.1-201ENST00000624190 671 ntBASIC4.95□□□□□ -1.62
VMP1Q96GC9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VMP1Q96GC9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms