Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 RPL26P30-202ENST00000602923 645 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 BNIP3P7-201ENST00000605641 516 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 MAPK10-263ENST00000641052 4307 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 AP000542.2-201ENST00000623199 6179 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 IL6STP1-201ENST00000346911 1020 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 RNU1-32P-201ENST00000363937 159 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTR9Q6PD62 RPS4XP9-201ENST00000405151 780 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 RNA5SP146-201ENST00000410743 123 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 CKS1BP6-201ENST00000424932 240 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 PTMAP3-201ENST00000447474 330 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC025423.2-201ENST00000537570 439 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTR9Q6PD62 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC131238.1-201ENST00000617135 328 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC015804.1-201ENST00000622935 435 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 AC004232.3-201ENST00000622977 525 ntBASIC5.56□□□□□ -1.52
CTR9Q6PD62 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTR9Q6PD62 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.56□□□□□ -1.52
CTR9Q6PD62 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 DDX18P3-201ENST00000404856 2007 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 RPS3AP23-201ENST00000401762 784 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 OR51A6P-201ENST00000418680 1004 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 EIF4A1P1-201ENST00000420241 934 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC006065.1-201ENST00000422539 802 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 RPL23AP1-201ENST00000428990 471 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC239798.3-201ENST00000454459 408 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC090142.1-201ENST00000465776 462 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 MTND4LP2-201ENST00000502312 285 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 RFPL4AP3-201ENST00000515267 345 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 RN7SKP92-201ENST00000517266 244 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 KCTD9P6-201ENST00000522306 950 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 AC010547.7-201ENST00000570323 333 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 OR7A19P-201ENST00000608051 733 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 AL023881.1-201ENST00000621088 301 ntBASIC5.55□□□□□ -1.52
CTR9Q6PD62 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTR9Q6PD62 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.55□□□□□ -1.52
CTR9Q6PD62 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTR9Q6PD62 KARSP3-201ENST00000571212 1504 ntBASIC5.54□□□□□ -1.52
CTR9Q6PD62 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 AL929601.4-201ENST00000613011 1341 ntBASIC5.54□□□□□ -1.52
CTR9Q6PD62 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTR9Q6PD62 AL031119.1-201ENST00000404707 1879 ntBASIC5.54□□□□□ -1.52
CTR9Q6PD62 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTR9Q6PD62 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTR9Q6PD62 AL512430.2-201ENST00000406786 339 ntBASIC5.54□□□□□ -1.52
CTR9Q6PD62 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.54□□□□□ -1.52
CTR9Q6PD62 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTR9Q6PD62 RPEP3-201ENST00000425462 676 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms