Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC234781.3-201ENST00000452540 973 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 AC011005.3-201ENST00000491624 395 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC093890.1-201ENST00000502554 540 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC010627.1-201ENST00000503819 1294 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC093720.1-201ENST00000505681 714 ntBASIC4.09□□□□□ -1.75
LMO4P61968 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.09□□□□□ -1.75
LMO4P61968 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 SNORA76.2-201ENST00000517095 137 ntBASIC4.09□□□□□ -1.75
LMO4P61968 RNU6-889P-201ENST00000517189 103 ntBASIC4.09□□□□□ -1.75
LMO4P61968 MTCYBP19-201ENST00000517463 1124 ntBASIC4.09□□□□□ -1.75
LMO4P61968 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMO4P61968 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.09□□□□□ -1.75
LMO4P61968 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.09□□□□□ -1.75
LMO4P61968 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.09□□□□□ -1.75
LMO4P61968 AP006289.1-201ENST00000538089 277 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.09□□□□□ -1.75
LMO4P61968 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.09□□□□□ -1.75
LMO4P61968 AC146944.4-201ENST00000602697 718 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AC021106.3-201ENST00000623925 531 ntBASIC4.09□□□□□ -1.75
LMO4P61968 AP000676.4-201ENST00000624659 623 ntBASIC4.09□□□□□ -1.75
LMO4P61968 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.09□□□□□ -1.75
LMO4P61968 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMO4P61968 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMO4P61968 MFSD8-216ENST00000641147 4009 ntBASIC4.09□□□□□ -1.75
LMO4P61968 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMO4P61968 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LMO4P61968 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMO4P61968 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
LMO4P61968 TTC39DP-201ENST00000416781 1688 ntBASIC4.09□□□□□ -1.76
LMO4P61968 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMO4P61968 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMO4P61968 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
LMO4P61968 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 MAPK10-338ENST00000641647 3362 ntBASIC4.08□□□□□ -1.76
LMO4P61968 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 RPS4XP9-201ENST00000405151 780 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL034374.1-201ENST00000406329 351 ntBASIC4.08□□□□□ -1.76
LMO4P61968 RPS16P5-201ENST00000406501 404 ntBASIC4.08□□□□□ -1.76
LMO4P61968 U3.32-201ENST00000408116 212 ntBASIC4.08□□□□□ -1.76
LMO4P61968 VN1R51P-201ENST00000411675 945 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 RPL12P9-201ENST00000412942 488 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.08□□□□□ -1.76
LMO4P61968 OR6K4P-201ENST00000423179 955 ntBASIC4.08□□□□□ -1.76
LMO4P61968 MTND4P24-201ENST00000424002 397 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AC245517.2-201ENST00000442890 346 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 MOB1AP2-201ENST00000446060 614 ntBASIC4.08□□□□□ -1.76
LMO4P61968 Z83846.1-201ENST00000446798 265 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 AC073264.2-201ENST00000448886 166 ntBASIC4.08□□□□□ -1.76
LMO4P61968 TPT1P13-201ENST00000449760 499 ntBASIC4.08□□□□□ -1.76
LMO4P61968 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.08□□□□□ -1.76
LMO4P61968 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.08□□□□□ -1.76
LMO4P61968 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 snoU109.3-201ENST00000459477 145 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC096992.1-201ENST00000459808 709 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AC006967.1-201ENST00000467608 589 ntBASIC4.08□□□□□ -1.76
LMO4P61968 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AC104982.1-201ENST00000478775 574 ntBASIC4.08□□□□□ -1.76
LMO4P61968 METTL15P1-201ENST00000481421 1045 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC116562.1-201ENST00000485355 781 ntBASIC4.08□□□□□ -1.76
LMO4P61968 RPSAP51-201ENST00000497462 645 ntBASIC4.08□□□□□ -1.76
LMO4P61968 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 AC093770.1-201ENST00000511559 571 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 RPS27AP18-201ENST00000515536 459 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms