Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 OR5P1P-201ENST00000299512 925 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 RNU1-94P-201ENST00000362627 173 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK4P57078 SNORD96B-201ENST00000386148 79 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 MIR3065-201ENST00000390137 79 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK4P57078 RPS24P12-201ENST00000402084 394 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK4P57078 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK4P57078 AC023141.6-201ENST00000429418 337 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 RPS29P17-201ENST00000430795 166 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AC073143.1-201ENST00000436316 395 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK4P57078 SERPINA7P1-201ENST00000443077 631 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AL591623.2-201ENST00000449978 222 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.82□□□□□ -1.48
RIPK4P57078 RPL21P6-201ENST00000479171 504 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 DEFB109F-201ENST00000491870 277 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK4P57078 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK4P57078 AC015795.1-201ENST00000513669 327 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.82□□□□□ -1.48
RIPK4P57078 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.82□□□□□ -1.48
RIPK4P57078 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 SNORD91B-202ENST00000608459 222 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK4P57078 AC005086.4-201ENST00000623065 213 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 AC011944.2-201ENST00000624440 683 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK4P57078 AC090017.1-201ENST00000548612 1779 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 CCT8P1-201ENST00000413611 1657 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK4P57078 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 MIR331-201ENST00000362302 94 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 RNA5SP509-201ENST00000364577 119 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 RNU4-25P-201ENST00000410569 230 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 P2RY10P2-201ENST00000416730 913 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 CHIAP3-201ENST00000423668 1133 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 CDY14P-201ENST00000431260 1014 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 CBX1P1-201ENST00000440184 427 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 CDY12P-201ENST00000440679 1015 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RIPK4P57078 CDY13P-201ENST00000445813 1015 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 CDY23P-201ENST00000451661 1014 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK4P57078 RN7SL98P-201ENST00000462271 300 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.81□□□□□ -1.48
RIPK4P57078 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.81□□□□□ -1.48
RIPK4P57078 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK4P57078 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK4P57078 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK4P57078 AC079587.1-201ENST00000603846 277 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 AL445423.1-201ENST00000609941 536 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 AC244517.3-201ENST00000616254 1235 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 AL121890.3-201ENST00000618494 516 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 MIR6810-201ENST00000622701 70 ntBASIC5.81□□□□□ -1.48
RIPK4P57078 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
RIPK4P57078 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK4P57078 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 RPS20P14-201ENST00000412545 360 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 RPL21P108-201ENST00000413857 481 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 PHBP16-201ENST00000446318 950 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 ATP5G1P3-201ENST00000463301 410 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 NDUFA5P9-201ENST00000472609 340 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 RN7SL810P-201ENST00000493031 276 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK4P57078 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK4P57078 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK4P57078 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK4P57078 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK4P57078 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 AL160290.3-201ENST00000604869 165 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 AC097505.1-201ENST00000610199 565 ntBASIC5.8□□□□□ -1.48
RIPK4P57078 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK4P57078 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RIPK4P57078 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK4P57078 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms