Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
CLDN20P56880 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN20P56880 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN20P56880 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 METTL21EP-201ENST00000298105 713 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 RNA5SP90-201ENST00000364801 99 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 MIR320B1-201ENST00000390209 79 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 RN7SKP16-201ENST00000410180 299 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 RPL36AP10-201ENST00000421785 322 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 MTCO2P23-201ENST00000425216 680 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 RPS4XP16-201ENST00000427198 791 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN20P56880 CYCSP11-201ENST00000436426 315 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 RPS29P10-201ENST00000439197 166 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 AL031584.1-201ENST00000447169 754 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 BTF3P6-201ENST00000448054 499 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 Z95152.1-201ENST00000453556 656 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AC108161.1-201ENST00000461060 402 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN20P56880 AC022133.1-201ENST00000490961 571 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 SNRPCP2-201ENST00000504370 475 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 AC022360.1-201ENST00000521058 340 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 MTND2P32-201ENST00000521584 1038 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AC022832.1-201ENST00000530718 645 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN20P56880 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 AL390334.1-201ENST00000556395 450 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AL158211.1-201ENST00000566763 763 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 MIR4509-3-201ENST00000578671 94 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN20P56880 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 MIR4509-2-201ENST00000583920 94 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN20P56880 AC011626.1-201ENST00000604710 562 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AL121612.2-201ENST00000612261 482 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 MIR4509-1-201ENST00000618224 94 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 BX005214.3-202ENST00000619809 325 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN20P56880 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CLDN20P56880 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 AC126323.6-202ENST00000568092 3511 ntBASIC4.7□□□□□ -1.66
CLDN20P56880 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN20P56880 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN20P56880 NXF4-202ENST00000416098 1465 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CLDN20P56880 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLDN20P56880 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN20P56880 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLDN20P56880 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN20P56880 RNU1-106P-201ENST00000384382 164 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 MIR105-2-201ENST00000385083 81 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 MIR589-201ENST00000385238 99 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 U3.36-201ENST00000408418 213 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN20P56880 HMGB3P31-201ENST00000413333 595 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN20P56880 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN20P56880 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN20P56880 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN20P56880 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN20P56880 AC090018.1-201ENST00000434369 367 ntBASIC4.69□□□□□ -1.66
CLDN20P56880 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.69□□□□□ -1.66
CLDN20P56880 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN20P56880 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms