Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC024941.1-201ENST00000612250 334 ntBASIC5.19□□□□□ -1.58
VCPP55072 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 DHX40P1-201ENST00000588725 1412 ntBASIC5.19□□□□□ -1.58
VCPP55072 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.19□□□□□ -1.58
VCPP55072 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
VCPP55072 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.18□□□□□ -1.58
VCPP55072 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VCPP55072 AP000542.2-201ENST00000623199 6179 ntBASIC5.18□□□□□ -1.58
VCPP55072 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 RN7SKP224-201ENST00000364140 325 ntBASIC5.18□□□□□ -1.58
VCPP55072 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 ELOCP19-201ENST00000411919 318 ntBASIC5.18□□□□□ -1.58
VCPP55072 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.18□□□□□ -1.58
VCPP55072 RPL23AP1-201ENST00000428990 471 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC006946.1-201ENST00000429106 328 ntBASIC5.18□□□□□ -1.58
VCPP55072 OR7E125P-201ENST00000443450 846 ntBASIC5.18□□□□□ -1.58
VCPP55072 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.18□□□□□ -1.58
VCPP55072 CEACAMP6-201ENST00000452007 574 ntBASIC5.18□□□□□ -1.58
VCPP55072 AURKAPS2-201ENST00000454983 333 ntBASIC5.18□□□□□ -1.58
VCPP55072 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.18□□□□□ -1.58
VCPP55072 RN7SKP276-201ENST00000516242 268 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.18□□□□□ -1.58
VCPP55072 AC133555.2-201ENST00000550213 292 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC007224.1-201ENST00000564410 144 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC034105.4-201ENST00000568304 277 ntBASIC5.18□□□□□ -1.58
VCPP55072 MTND2P13-201ENST00000577438 1039 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC233702.9-201ENST00000581528 203 ntBASIC5.18□□□□□ -1.58
VCPP55072 RN7SL435P-201ENST00000584418 282 ntBASIC5.18□□□□□ -1.58
VCPP55072 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.18□□□□□ -1.58
VCPP55072 MIR6716-201ENST00000613413 80 ntBASIC5.18□□□□□ -1.58
VCPP55072 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 AC002044.3-201ENST00000623314 541 ntBASIC5.18□□□□□ -1.58
VCPP55072 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.18□□□□□ -1.58
VCPP55072 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.18□□□□□ -1.58
VCPP55072 AL137100.1-201ENST00000556703 1620 ntBASIC5.18□□□□□ -1.58
VCPP55072 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.18□□□□□ -1.58
VCPP55072 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 CCT8P1-201ENST00000413611 1657 ntBASIC5.18□□□□□ -1.58
VCPP55072 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VCPP55072 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
VCPP55072 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.17□□□□□ -1.58
VCPP55072 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.17□□□□□ -1.58
VCPP55072 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.17□□□□□ -1.58
VCPP55072 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.17□□□□□ -1.58
VCPP55072 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
VCPP55072 OR4K15-201ENST00000305051 1216 ntBASIC5.17□□□□□ -1.58
VCPP55072 SNORA73.1-201ENST00000363107 205 ntBASIC5.17□□□□□ -1.58
VCPP55072 RNU1-64P-201ENST00000365443 163 ntBASIC5.17□□□□□ -1.58
VCPP55072 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 ATP5HP3-201ENST00000396994 486 ntBASIC5.17□□□□□ -1.58
VCPP55072 TMBIM7P-201ENST00000418074 855 ntBASIC5.17□□□□□ -1.58
VCPP55072 QRSL1P2-201ENST00000418582 964 ntBASIC5.17□□□□□ -1.58
VCPP55072 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 AL359073.1-201ENST00000448036 403 ntBASIC5.17□□□□□ -1.58
VCPP55072 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.17□□□□□ -1.58
VCPP55072 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 AL133244.1-201ENST00000456007 258 ntBASIC5.17□□□□□ -1.58
VCPP55072 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.17□□□□□ -1.58
VCPP55072 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.17□□□□□ -1.58
VCPP55072 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.17□□□□□ -1.58
VCPP55072 AC025857.1-201ENST00000525252 377 ntBASIC5.17□□□□□ -1.58
VCPP55072 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 AC005377.1-201ENST00000605126 456 ntBASIC5.17□□□□□ -1.58
VCPP55072 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.17□□□□□ -1.58
VCPP55072 AC004232.3-201ENST00000622977 525 ntBASIC5.17□□□□□ -1.58
VCPP55072 AC011944.2-201ENST00000624440 683 ntBASIC5.17□□□□□ -1.58
VCPP55072 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VCPP55072 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VCPP55072 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VCPP55072 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 RNA5SP447-201ENST00000363749 119 ntBASIC5.16□□□□□ -1.58
VCPP55072 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 RPL32P23-201ENST00000397237 405 ntBASIC5.16□□□□□ -1.58
VCPP55072 AL359643.1-201ENST00000404109 423 ntBASIC5.16□□□□□ -1.58
VCPP55072 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
VCPP55072 AL158073.1-201ENST00000426848 1104 ntBASIC5.16□□□□□ -1.58
VCPP55072 AC093414.1-201ENST00000434712 514 ntBASIC5.16□□□□□ -1.58
VCPP55072 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms