Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL12P48061 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL12P48061 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL12P48061 snoU13.22-201ENST00000459428 104 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL12P48061 FTH1P11-201ENST00000517577 551 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 AP001804.2-201ENST00000533932 910 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL12P48061 AC007066.2-202ENST00000566531 914 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 AC020634.1-201ENST00000608701 549 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 RNA5SP439-201ENST00000617595 124 ntBASIC4.53□□□□□ -1.68
CXCL12P48061 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL12P48061 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CXCL12P48061 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL12P48061 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.53□□□□□ -1.69
CXCL12P48061 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 AC099654.3-201ENST00000447087 1546 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 RNA5SP283-201ENST00000365604 119 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 MT-RNR1-201ENST00000389680 954 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 ARL4AP5-201ENST00000404372 599 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 RN7SKP16-201ENST00000410180 299 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL12P48061 RGS17P1-201ENST00000423358 553 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 VTI1BP4-201ENST00000427516 527 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 RPS20P4-201ENST00000461659 355 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 AL132838.2-201ENST00000492041 314 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 AC097486.1-201ENST00000515331 210 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CXCL12P48061 AL049830.4-201ENST00000555149 351 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 AC053481.3-201ENST00000577881 843 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL12P48061 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 MIR8059-201ENST00000620427 81 ntBASIC4.52□□□□□ -1.69
CXCL12P48061 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CXCL12P48061 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
CXCL12P48061 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL12P48061 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL12P48061 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL12P48061 AC008033.1-201ENST00000216407 1162 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CXCL12P48061 MIR372-201ENST00000362225 67 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 MIR331-201ENST00000362302 94 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 SNORA11F-201ENST00000408237 128 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL12P48061 CYP4F29P-201ENST00000420685 446 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL12P48061 VN1R34P-201ENST00000447387 883 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 SEPT7P3-201ENST00000455017 621 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 DHFRP3-201ENST00000455595 559 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 RN7SL542P-201ENST00000467147 294 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL12P48061 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL12P48061 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 AC040958.1-201ENST00000561102 201 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL12P48061 MIR4286-201ENST00000580651 93 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.51□□□□□ -1.69
CXCL12P48061 AC016252.1-201ENST00000609721 474 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 OR8G7P-201ENST00000616658 848 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 AP000648.2-201ENST00000624182 404 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 OR2L1P-202ENST00000641567 1023 ntBASIC4.51□□□□□ -1.69
CXCL12P48061 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL12P48061 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL12P48061 LARP1BP1-201ENST00000506036 1359 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms