Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.27□□□□□ -1.57
NEDD4P46934 AL160290.3-201ENST00000604869 165 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AL391597.1-201ENST00000618707 694 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.27□□□□□ -1.57
NEDD4P46934 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NEDD4P46934 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 NOL8P1-201ENST00000508336 3529 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.27□□□□□ -1.57
NEDD4P46934 OR51H2P-202ENST00000641424 3046 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 AC068870.3-201ENST00000625077 2536 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 Y_RNA.625-201ENST00000411256 107 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 FAR2P2-201ENST00000413041 594 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 GNG5P5-201ENST00000420444 220 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 FAR2P4-202ENST00000425399 584 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.26□□□□□ -1.57
NEDD4P46934 H2AFZP6-201ENST00000444403 394 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 RAD1P2-201ENST00000446414 663 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.26□□□□□ -1.57
NEDD4P46934 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.26□□□□□ -1.57
NEDD4P46934 RPS4XP12-201ENST00000461747 709 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.26□□□□□ -1.57
NEDD4P46934 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
NEDD4P46934 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.26□□□□□ -1.57
NEDD4P46934 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 AC021146.3-201ENST00000511911 260 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 C1GALT1P3-201ENST00000522049 819 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.26□□□□□ -1.57
NEDD4P46934 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 AC018552.1-201ENST00000562099 811 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AP005019.3-201ENST00000620418 560 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AC006065.6-201ENST00000625201 545 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.26□□□□□ -1.57
NEDD4P46934 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.26□□□□□ -1.57
NEDD4P46934 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.26□□□□□ -1.57
NEDD4P46934 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.26□□□□□ -1.57
NEDD4P46934 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 EOGT-210ENST00000615922 1931 ntBASIC5.26□□□□□ -1.57
NEDD4P46934 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEDD4P46934 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
NEDD4P46934 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.25□□□□□ -1.57
NEDD4P46934 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 FAM3C2-201ENST00000312214 681 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 AL583835.1-201ENST00000399570 407 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.25□□□□□ -1.57
NEDD4P46934 AL356387.2-201ENST00000422272 243 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 DNAJC19P7-201ENST00000428811 344 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 AC068287.1-201ENST00000430283 295 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 UBE2V1P3-201ENST00000439651 417 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 AC053481.1-201ENST00000467217 306 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.25□□□□□ -1.57
NEDD4P46934 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.25□□□□□ -1.57
NEDD4P46934 AC011270.1-201ENST00000558606 583 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.25□□□□□ -1.57
NEDD4P46934 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.25□□□□□ -1.57
NEDD4P46934 AL118556.2-201ENST00000614375 824 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 MIR7641-1-201ENST00000627518 61 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 AL513548.1-201ENST00000562904 1724 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 AC083843.2-201ENST00000568248 6253 ntBASIC5.25□□□□□ -1.57
NEDD4P46934 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEDD4P46934 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NEDD4P46934 Y_RNA.62-201ENST00000362840 99 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD4P46934 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD4P46934 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.24□□□□□ -1.57
NEDD4P46934 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.24□□□□□ -1.57
NEDD4P46934 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.24□□□□□ -1.57
NEDD4P46934 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD4P46934 AC020937.1-201ENST00000519677 1013 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.24□□□□□ -1.57
NEDD4P46934 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.24□□□□□ -1.57
NEDD4P46934 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
NEDD4P46934 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.24□□□□□ -1.57
NEDD4P46934 RPL21P7-201ENST00000557463 483 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD4P46934 AC124068.1-201ENST00000563131 678 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AC233702.9-201ENST00000581528 203 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AC008966.2-201ENST00000606157 453 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 AC090948.1-201ENST00000607464 549 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.24□□□□□ -1.57
NEDD4P46934 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms