Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORD65C-201ENST00000390962 71 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 OOSP1-201ENST00000398992 1270 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL390316.1-201ENST00000406279 553 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RN7SKP97-201ENST00000410966 333 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RNU6-603P-201ENST00000411403 107 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-1P43699 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-1P43699 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 NPM1P24-201ENST00000428039 894 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 BX323845.3-201ENST00000428215 527 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AL450996.1-201ENST00000445574 1202 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL050341.1-201ENST00000447743 313 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC008280.2-201ENST00000455473 307 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RPL37P3-201ENST00000456825 293 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 RN7SL515P-201ENST00000463999 297 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RPS23P6-201ENST00000466136 431 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 RN7SL741P-201ENST00000482473 289 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 EIF1P7-201ENST00000487533 337 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RPL37P23-201ENST00000492641 294 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 HPRT1P2-201ENST00000505250 544 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC073358.1-201ENST00000505671 684 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 HMGB1P44-201ENST00000508597 572 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 RNU6-615P-201ENST00000516065 106 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RNA5SP228-201ENST00000516232 133 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 RNA5SP271-201ENST00000516700 88 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-1P43699 COX6B1P6-201ENST00000522347 255 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC010306.1-201ENST00000523223 1117 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 TRIM77BP-201ENST00000524985 1119 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC124293.1-201ENST00000530034 493 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 AP004607.2-201ENST00000533949 322 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 IGBP1P1-201ENST00000554337 1009 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AL049838.1-201ENST00000563647 981 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC092121.1-201ENST00000569452 202 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 MIR4789-201ENST00000577469 82 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AP005262.1-201ENST00000582646 997 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AC012616.1-201ENST00000600294 197 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL022067.1-201ENST00000602426 454 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL138895.2-201ENST00000603019 178 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC067773.1-201ENST00000603284 1094 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC096553.1-201ENST00000605169 829 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AC100847.1-201ENST00000611316 481 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 AL139407.1-201ENST00000613826 1175 ntBASIC4.26□□□□□ -1.73
NKX2-1P43699 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-1P43699 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NKX2-1P43699 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-1P43699 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-1P43699 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NKX2-1P43699 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC126323.6-202ENST00000568092 3511 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 BMS1P3-201ENST00000372011 932 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 U6.112-201ENST00000384129 70 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 RNU6-549P-201ENST00000384433 107 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC005522.1-201ENST00000395416 346 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 ANAPC10P1-201ENST00000395991 556 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 RN7SKP125-201ENST00000410481 302 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 RN7SKP286-201ENST00000410894 299 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 USP9YP21-201ENST00000420603 432 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC009965.2-201ENST00000425328 970 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC127526.2-201ENST00000426436 775 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms