Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TNFSF9P41273 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNFSF9P41273 TCP11X1-202ENST00000622971 1372 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF9P41273 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TNFSF9P41273 OR5P1P-201ENST00000299512 925 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 SNORA70.2-201ENST00000364506 135 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AL583835.1-201ENST00000399570 407 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AL049693.1-201ENST00000402760 611 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AL356967.1-201ENST00000406305 431 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 MIR1271-201ENST00000408537 86 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF9P41273 RPS29P17-201ENST00000430795 166 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 RPEP2-201ENST00000432149 701 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF9P41273 PHBP16-201ENST00000446318 950 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 RN7SL98P-201ENST00000462271 300 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 ATP5G1P3-201ENST00000463301 410 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AC017007.3-201ENST00000479865 435 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AC098583.1-201ENST00000480875 255 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF9P41273 IGBP1P5-201ENST00000507524 1000 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF9P41273 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.8□□□□□ -1.64
TNFSF9P41273 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 TRAV8-5-201ENST00000537369 341 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 AC234775.3-201ENST00000564612 656 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFSF9P41273 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF9P41273 AL035461.2-201ENST00000619201 524 ntBASIC4.8□□□□□ -1.64
TNFSF9P41273 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF9P41273 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TNFSF9P41273 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNFSF9P41273 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFSF9P41273 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFSF9P41273 AC023141.6-201ENST00000429418 337 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFSF9P41273 OR11I1P-201ENST00000486033 954 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AGGF1P3-201ENST00000493675 1213 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AC015795.1-201ENST00000513669 327 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFSF9P41273 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 VN1R81P-201ENST00000602085 372 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AC079587.1-201ENST00000603846 277 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AC067838.1-201ENST00000606064 577 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 AC006338.2-201ENST00000616864 791 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AC016717.3-201ENST00000624730 554 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 AC009950.2-201ENST00000636548 183 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF9P41273 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
TNFSF9P41273 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFSF9P41273 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF9P41273 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AP001002.1-201ENST00000625148 1513 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AC097374.1-203ENST00000400783 485 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 NRBF2P2-201ENST00000413087 861 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AC010740.1-201ENST00000417035 684 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 PTP4A1P1-201ENST00000420539 515 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms