Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC4P35249 RN7SKP202-201ENST00000410439 330 ntBASIC5.72□□□□□ -1.49
RFC4P35249 SNORA79B-201ENST00000410557 148 ntBASIC5.72□□□□□ -1.49
RFC4P35249 E2F6P2-201ENST00000420708 748 ntBASIC5.72□□□□□ -1.49
RFC4P35249 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.72□□□□□ -1.49
RFC4P35249 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC4P35249 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFC4P35249 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC4P35249 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.72□□□□□ -1.49
RFC4P35249 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.72□□□□□ -1.49
RFC4P35249 AL358913.1-201ENST00000554342 121 ntBASIC5.72□□□□□ -1.49
RFC4P35249 AL049830.4-201ENST00000555149 351 ntBASIC5.72□□□□□ -1.49
RFC4P35249 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RFC4P35249 AC010547.7-201ENST00000570323 333 ntBASIC5.72□□□□□ -1.49
RFC4P35249 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.72□□□□□ -1.49
RFC4P35249 AC010487.1-201ENST00000594408 1172 ntBASIC5.72□□□□□ -1.49
RFC4P35249 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC4P35249 DDX18P5-201ENST00000534547 1306 ntBASIC5.72□□□□□ -1.49
RFC4P35249 AC010266.2-201ENST00000564741 3255 ntBASIC5.72□□□□□ -1.49
RFC4P35249 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC4P35249 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFC4P35249 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RFC4P35249 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
RFC4P35249 AP000542.2-201ENST00000623199 6179 ntBASIC5.71□□□□□ -1.5
RFC4P35249 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC4P35249 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 AC008033.1-201ENST00000216407 1162 ntBASIC5.71□□□□□ -1.5
RFC4P35249 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFC4P35249 RNU6-673P-201ENST00000365084 104 ntBASIC5.71□□□□□ -1.5
RFC4P35249 SNORA5.1-201ENST00000384275 131 ntBASIC5.71□□□□□ -1.5
RFC4P35249 CYCSP24-201ENST00000445119 316 ntBASIC5.71□□□□□ -1.5
RFC4P35249 RPL23AP43-201ENST00000446445 471 ntBASIC5.71□□□□□ -1.5
RFC4P35249 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC4P35249 DHFRP3-201ENST00000455595 559 ntBASIC5.71□□□□□ -1.5
RFC4P35249 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC4P35249 TRAV8-5-201ENST00000537369 341 ntBASIC5.71□□□□□ -1.5
RFC4P35249 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 AC027216.1-201ENST00000577726 685 ntBASIC5.71□□□□□ -1.5
RFC4P35249 MIR3158-1-201ENST00000583596 81 ntBASIC5.71□□□□□ -1.5
RFC4P35249 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC4P35249 uc_338.13-201ENST00000618243 179 ntBASIC5.71□□□□□ -1.5
RFC4P35249 OR2L1P-202ENST00000641567 1023 ntBASIC5.71□□□□□ -1.5
RFC4P35249 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC4P35249 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFC4P35249 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC4P35249 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFC4P35249 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC4P35249 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
RFC4P35249 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC4P35249 AL929601.4-201ENST00000613011 1341 ntBASIC5.71□□□□□ -1.5
RFC4P35249 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC4P35249 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 MIR372-201ENST00000362225 67 ntBASIC5.7□□□□□ -1.5
RFC4P35249 MIR331-201ENST00000362302 94 ntBASIC5.7□□□□□ -1.5
RFC4P35249 RNA5SP283-201ENST00000365604 119 ntBASIC5.7□□□□□ -1.5
RFC4P35249 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 MIR670-201ENST00000390142 98 ntBASIC5.7□□□□□ -1.5
RFC4P35249 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 AC006946.1-201ENST00000429106 328 ntBASIC5.7□□□□□ -1.5
RFC4P35249 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 SERPINA7P1-201ENST00000443077 631 ntBASIC5.7□□□□□ -1.5
RFC4P35249 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 RN7SL132P-201ENST00000478131 296 ntBASIC5.7□□□□□ -1.5
RFC4P35249 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 AC087477.6-201ENST00000559595 843 ntBASIC5.7□□□□□ -1.5
RFC4P35249 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC4P35249 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 AC074140.1-201ENST00000621617 208 ntBASIC5.7□□□□□ -1.5
RFC4P35249 AC112484.5-201ENST00000624189 228 ntBASIC5.7□□□□□ -1.5
RFC4P35249 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC4P35249 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC4P35249 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
RFC4P35249 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC4P35249 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC4P35249 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC4P35249 TTC39DP-201ENST00000416781 1688 ntBASIC5.69□□□□□ -1.5
RFC4P35249 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC4P35249 LARP1BP1-201ENST00000506036 1359 ntBASIC5.69□□□□□ -1.5
RFC4P35249 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC4P35249 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC4P35249 EIF4A1P3-201ENST00000411521 244 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms