Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN6P29350 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC010627.1-201ENST00000503819 1294 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN6P29350 NDUFB5P1-201ENST00000508134 564 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 PGBD4P4-201ENST00000509673 613 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.61□□□□□ -1.67
PTPN6P29350 AF186190.1-201ENST00000517470 480 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.61□□□□□ -1.67
PTPN6P29350 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC068446.3-201ENST00000555285 382 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC012414.2-201ENST00000559474 187 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC087477.6-201ENST00000559595 843 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC024940.4-201ENST00000605507 246 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC116651.1-201ENST00000609724 556 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
PTPN6P29350 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN6P29350 AC007382.1-201ENST00000624376 2618 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN6P29350 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTPN6P29350 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN6P29350 AC131971.1-201ENST00000332881 1482 ntBASIC4.61□□□□□ -1.67
PTPN6P29350 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PTPN6P29350 AC114546.3-201ENST00000623582 1734 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN6P29350 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 AC000123.3-201ENST00000624029 4975 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 AC011155.1-201ENST00000316512 456 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 RN7SKP104-201ENST00000362605 328 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 SNORA27.3-201ENST00000364937 134 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN6P29350 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN6P29350 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.6□□□□□ -1.67
PTPN6P29350 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 RPL26P37-201ENST00000411983 438 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN6P29350 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC048351.1-201ENST00000420064 602 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 RPL12P34-201ENST00000424532 479 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN6P29350 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 AL357520.1-201ENST00000441557 453 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 TRY2P-201ENST00000448860 689 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 RPL7P61-201ENST00000451721 751 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN6P29350 RPS6P2-201ENST00000454208 705 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC090543.1-201ENST00000492168 485 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN6P29350 NPM1P6-201ENST00000521088 871 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.6□□□□□ -1.67
PTPN6P29350 OR5AZ1P-201ENST00000527448 943 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 AL136295.6-201ENST00000610486 658 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 AL022401.1-201ENST00000619498 108 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC015804.1-201ENST00000622935 435 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC091905.4-201ENST00000623432 202 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 AC087190.4-201ENST00000574616 8334 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN6P29350 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN6P29350 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTPN6P29350 INTS6P1-201ENST00000504674 2530 ntBASIC4.6□□□□□ -1.67
PTPN6P29350 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN6P29350 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN6P29350 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN6P29350 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PTPN6P29350 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN6P29350 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN6P29350 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN6P29350 MIR320B1-201ENST00000390209 79 ntBASIC4.59□□□□□ -1.67
PTPN6P29350 MIR550A3-201ENST00000390735 95 ntBASIC4.59□□□□□ -1.67
PTPN6P29350 AL358176.3-201ENST00000420757 454 ntBASIC4.59□□□□□ -1.67
PTPN6P29350 FABP7P1-201ENST00000424004 391 ntBASIC4.59□□□□□ -1.67
PTPN6P29350 AL590623.1-201ENST00000427864 105 ntBASIC4.59□□□□□ -1.67
PTPN6P29350 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN6P29350 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN6P29350 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms