Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AL162632.2-201ENST00000553933 399 ntBASIC7.17□□□□□ -1.26
VARSP26640 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 APOOP1-201ENST00000604695 592 ntBASIC7.17□□□□□ -1.26
VARSP26640 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.17□□□□□ -1.26
VARSP26640 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 AC022418.1-201ENST00000624118 445 ntBASIC7.17□□□□□ -1.26
VARSP26640 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 AL357556.1-201ENST00000421884 1388 ntBASIC7.17□□□□□ -1.26
VARSP26640 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
VARSP26640 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 AC005034.3-201ENST00000604845 1747 ntBASIC7.16□□□□□ -1.26
VARSP26640 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VARSP26640 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VARSP26640 RNU5E-1-201ENST00000362477 120 ntBASIC7.16□□□□□ -1.26
VARSP26640 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 SNORA51.7-201ENST00000384171 134 ntBASIC7.16□□□□□ -1.26
VARSP26640 MIR506-201ENST00000384998 124 ntBASIC7.16□□□□□ -1.26
VARSP26640 RPL24P7-201ENST00000399435 453 ntBASIC7.16□□□□□ -1.26
VARSP26640 AL583835.1-201ENST00000399570 407 ntBASIC7.16□□□□□ -1.26
VARSP26640 Y_RNA.615-201ENST00000410769 117 ntBASIC7.16□□□□□ -1.26
VARSP26640 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 AC244452.1-201ENST00000413798 141 ntBASIC7.16□□□□□ -1.26
VARSP26640 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 SLC35E1P1-201ENST00000419313 864 ntBASIC7.16□□□□□ -1.26
VARSP26640 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 AC005517.2-201ENST00000424673 553 ntBASIC7.16□□□□□ -1.26
VARSP26640 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 RBMY2QP-201ENST00000429799 1147 ntBASIC7.16□□□□□ -1.26
VARSP26640 AL356276.2-201ENST00000435919 558 ntBASIC7.16□□□□□ -1.26
VARSP26640 AMYP1-201ENST00000440059 1023 ntBASIC7.16□□□□□ -1.26
VARSP26640 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 SS18L2P1-201ENST00000445923 213 ntBASIC7.16□□□□□ -1.26
VARSP26640 AL451074.4-201ENST00000447545 470 ntBASIC7.16□□□□□ -1.26
VARSP26640 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 AC021074.2-201ENST00000468434 172 ntBASIC7.16□□□□□ -1.26
VARSP26640 RN7SL58P-201ENST00000473445 294 ntBASIC7.16□□□□□ -1.26
VARSP26640 AC117394.1-201ENST00000477323 567 ntBASIC7.16□□□□□ -1.26
VARSP26640 AC084878.1-201ENST00000480555 648 ntBASIC7.16□□□□□ -1.26
VARSP26640 HMGB1P30-201ENST00000492455 606 ntBASIC7.16□□□□□ -1.26
VARSP26640 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.16□□□□□ -1.26
VARSP26640 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 AC117383.2-201ENST00000514722 322 ntBASIC7.16□□□□□ -1.26
VARSP26640 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 BNIP3P6-201ENST00000549284 499 ntBASIC7.16□□□□□ -1.26
VARSP26640 OR5BK1P-201ENST00000550421 823 ntBASIC7.16□□□□□ -1.26
VARSP26640 MYL12BP1-201ENST00000569826 507 ntBASIC7.16□□□□□ -1.26
VARSP26640 AC024614.1-201ENST00000577546 307 ntBASIC7.16□□□□□ -1.26
VARSP26640 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.16□□□□□ -1.26
VARSP26640 OR5AH1P-201ENST00000595968 283 ntBASIC7.16□□□□□ -1.26
VARSP26640 OR7E94P-202ENST00000601375 790 ntBASIC7.16□□□□□ -1.26
VARSP26640 RPL26P30-202ENST00000602923 645 ntBASIC7.16□□□□□ -1.26
VARSP26640 AL022345.1-201ENST00000607292 135 ntBASIC7.16□□□□□ -1.26
VARSP26640 AC135068.12-201ENST00000637370 931 ntBASIC7.16□□□□□ -1.26
VARSP26640 OR2L1P-202ENST00000641567 1023 ntBASIC7.16□□□□□ -1.26
VARSP26640 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.16□□□□□ -1.26
VARSP26640 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
VARSP26640 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VARSP26640 MAPK10-383ENST00000642032 3390 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms