Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.67□□□□□ -1.66
XRCC1P18887 RPL26P29-201ENST00000415623 438 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC019050.1-201ENST00000418508 492 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AL358176.3-201ENST00000420757 454 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AL645608.4-201ENST00000423619 154 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 CYCSP11-201ENST00000436426 315 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC016831.4-201ENST00000438302 307 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC004938.1-201ENST00000438468 308 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 ARL4AP3-201ENST00000441452 574 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC011753.3-201ENST00000443436 406 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-599P-201ENST00000459383 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-1193P-201ENST00000459461 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC010326.1-201ENST00000462726 602 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 STRADBP1-201ENST00000478954 1281 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RN7SL817P-201ENST00000480777 288 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 RNA5SP228-201ENST00000516232 133 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 OR7E10P-201ENST00000526420 991 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.67□□□□□ -1.66
XRCC1P18887 GSTP1P1-201ENST00000548078 319 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC068790.7-201ENST00000602347 528 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC026979.4-201ENST00000606555 645 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 MIR6748-201ENST00000610433 71 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-368P-201ENST00000620928 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-538P-201ENST00000622329 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.67□□□□□ -1.66
XRCC1P18887 AC006453.5-201ENST00000636451 619 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
XRCC1P18887 ZFRP1-201ENST00000457579 2970 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
XRCC1P18887 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 MAPK10-286ENST00000641208 8747 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 AC092435.4-201ENST00000623012 4159 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 RLIMP2-201ENST00000427891 1563 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 AC010132.2-201ENST00000295493 1043 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 MIR7-1-201ENST00000384871 110 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 AC013470.3-201ENST00000420252 1194 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 MAPRE1P3-201ENST00000435438 796 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 RPS29P33-201ENST00000456717 146 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AC107015.1-201ENST00000466902 747 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 RN7SL205P-201ENST00000490174 284 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.66□□□□□ -1.66
XRCC1P18887 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 RPL21P7-201ENST00000557463 483 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.66□□□□□ -1.66
XRCC1P18887 MIR4330-201ENST00000579077 105 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 RN7SL690P-201ENST00000582087 240 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 AC234771.5-201ENST00000600161 514 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 AC012213.4-201ENST00000606457 354 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 AC140113.4-201ENST00000622087 222 ntBASIC4.66□□□□□ -1.66
XRCC1P18887 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XRCC1P18887 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
XRCC1P18887 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
XRCC1P18887 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms