Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC012254.5-201ENST00000623573 478 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 TNPO1P2-201ENST00000426249 2665 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 U3.7-201ENST00000363668 216 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AL512430.2-201ENST00000406786 339 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 USP9YP6-201ENST00000413550 854 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC007394.1-201ENST00000421941 531 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 PRUNEP1-201ENST00000425846 705 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 B3GNT2P1-201ENST00000434960 952 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 KATNBL1P6-201ENST00000453433 915 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 USP9YP34-201ENST00000453983 808 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 RPL7P48-201ENST00000461513 746 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 RPL32P9-201ENST00000487963 407 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC108693.1-201ENST00000496068 432 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 HMGN2P36-201ENST00000529541 409 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AP002812.4-201ENST00000532139 286 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 IMMP1LP1-201ENST00000605170 488 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC004948.1-201ENST00000609858 672 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC007014.2-201ENST00000615581 479 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AL136981.2-201ENST00000617319 734 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 OFD1P17-201ENST00000437639 3018 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 AC005539.1-201ENST00000443768 1479 ntBASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CSB-PGBD3P0DP91 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC241584.2-201ENST00000637142 2090 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AL391994.1-201ENST00000254724 282 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 RNU1-19P-201ENST00000363306 165 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SKP59-201ENST00000410520 314 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 RNU6-77P-201ENST00000410554 91 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 RPL7P8-201ENST00000411964 730 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CYP4F30P-202ENST00000420048 405 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 MRPS36P1-201ENST00000421291 307 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 NMD3P2-201ENST00000421815 761 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 BZW1P1-201ENST00000454901 1240 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC004924.1-201ENST00000480160 781 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC010587.2-201ENST00000511727 448 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 SCARNA15.1-201ENST00000516384 125 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 SNORA43.3-201ENST00000517240 103 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms