Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RAB40ALP0C0E4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RAB40ALP0C0E4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 MTCO1P4-201ENST00000520516 1409 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 RPS4XP9-201ENST00000405151 780 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 UBE2V1P11-201ENST00000411559 285 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 MTCO3P4-201ENST00000419236 787 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 PNRC2P1-201ENST00000423940 420 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 GTF3AP5-201ENST00000442645 697 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 MTND2P39-201ENST00000457230 764 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC092902.1-201ENST00000486999 259 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC010350.1-201ENST00000504908 231 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC133963.2-201ENST00000513686 578 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AL671862.1-201ENST00000515851 349 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 RNU6-513P-201ENST00000516104 104 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 snoU109.6-201ENST00000516831 118 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC100784.1-201ENST00000522790 310 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 NPM1P47-201ENST00000560843 856 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AL390726.5-202ENST00000564800 256 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 MIR548Y-201ENST00000582739 110 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AL031320.1-201ENST00000604177 357 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC018618.2-201ENST00000604770 446 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC106858.1-201ENST00000637497 429 ntBASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RAB40ALP0C0E4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 THAP12P5-201ENST00000405864 2275 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 RNVU1-6-201ENST00000364688 164 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 SNORA2.3-201ENST00000383920 135 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 RPL12P9-201ENST00000412942 488 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC007738.1-201ENST00000413892 348 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AL590139.1-201ENST00000416267 400 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 LINC01347-201ENST00000417964 355 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 GNG5P5-201ENST00000420444 220 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC245028.1-201ENST00000423259 256 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC007559.1-201ENST00000428736 355 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 RPL7P11-201ENST00000437586 658 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CEACAMP9-201ENST00000442990 513 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC097499.1-201ENST00000444277 208 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 NPM1P39-201ENST00000449818 867 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CYCSP42-201ENST00000450823 238 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 IGHV5-78-201ENST00000450948 295 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC093890.1-201ENST00000502554 540 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 SOX5P1-201ENST00000524155 1127 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 MIR3936-201ENST00000584304 110 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC087283.1-201ENST00000604029 1074 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 BNIP3P35-201ENST00000604530 490 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 AC079610.2-201ENST00000604818 690 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.74□□□□□ -1.65
RAB40ALP0C0E4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms