Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 RNU6-1320P-201ENST00000390838 107 ntBASIC4.84□□□□□ -1.63
RETP07949 RNU6-1269P-201ENST00000391139 107 ntBASIC4.84□□□□□ -1.63
RETP07949 AL445189.1-201ENST00000405722 338 ntBASIC4.84□□□□□ -1.63
RETP07949 AL356968.2-201ENST00000412769 1257 ntBASIC4.84□□□□□ -1.63
RETP07949 AL389915.1-201ENST00000422463 466 ntBASIC4.84□□□□□ -1.63
RETP07949 RPEP3-201ENST00000425462 676 ntBASIC4.84□□□□□ -1.63
RETP07949 TDGF1P1-201ENST00000445734 527 ntBASIC4.84□□□□□ -1.63
RETP07949 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.84□□□□□ -1.63
RETP07949 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.84□□□□□ -1.63
RETP07949 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.84□□□□□ -1.63
RETP07949 RNU6-599P-201ENST00000459383 107 ntBASIC4.84□□□□□ -1.63
RETP07949 RNU6-1193P-201ENST00000459461 107 ntBASIC4.84□□□□□ -1.63
RETP07949 UBA52P3-201ENST00000491303 382 ntBASIC4.84□□□□□ -1.63
RETP07949 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.84□□□□□ -1.63
RETP07949 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.84□□□□□ -1.63
RETP07949 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.84□□□□□ -1.63
RETP07949 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.84□□□□□ -1.63
RETP07949 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.84□□□□□ -1.63
RETP07949 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.84□□□□□ -1.63
RETP07949 RNU6-368P-201ENST00000620928 107 ntBASIC4.84□□□□□ -1.63
RETP07949 RNU6-538P-201ENST00000622329 107 ntBASIC4.84□□□□□ -1.63
RETP07949 AC015871.5-202ENST00000623252 701 ntBASIC4.84□□□□□ -1.63
RETP07949 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RETP07949 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RETP07949 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.64
RETP07949 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.83□□□□□ -1.64
RETP07949 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
RETP07949 ECM1P2-201ENST00000503354 1577 ntBASIC4.83□□□□□ -1.64
RETP07949 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.83□□□□□ -1.64
RETP07949 AL122126.1-201ENST00000546905 1318 ntBASIC4.83□□□□□ -1.64
RETP07949 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RETP07949 LINC01109-201ENST00000603837 3081 ntBASIC4.83□□□□□ -1.64
RETP07949 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 AC019155.1-201ENST00000382242 574 ntBASIC4.83□□□□□ -1.64
RETP07949 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
RETP07949 SNORA70C-201ENST00000384538 135 ntBASIC4.83□□□□□ -1.64
RETP07949 RPS24P12-201ENST00000402084 394 ntBASIC4.83□□□□□ -1.64
RETP07949 AL591848.1-201ENST00000413092 322 ntBASIC4.83□□□□□ -1.64
RETP07949 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.83□□□□□ -1.64
RETP07949 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
RETP07949 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.83□□□□□ -1.64
RETP07949 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.83□□□□□ -1.64
RETP07949 RN7SL441P-201ENST00000492388 296 ntBASIC4.83□□□□□ -1.64
RETP07949 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 AC026688.1-201ENST00000520639 1168 ntBASIC4.83□□□□□ -1.64
RETP07949 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 MED28P5-201ENST00000528254 438 ntBASIC4.83□□□□□ -1.64
RETP07949 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 AC069061.3-201ENST00000582254 823 ntBASIC4.83□□□□□ -1.64
RETP07949 AC069366.1-201ENST00000583159 838 ntBASIC4.83□□□□□ -1.64
RETP07949 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 AC019206.1-201ENST00000621938 425 ntBASIC4.83□□□□□ -1.64
RETP07949 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RETP07949 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
RETP07949 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RETP07949 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.83□□□□□ -1.64
RETP07949 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
RETP07949 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RETP07949 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RETP07949 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RETP07949 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RETP07949 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
RETP07949 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.82□□□□□ -1.64
RETP07949 CASC19-255ENST00000641733 1385 ntBASIC4.82□□□□□ -1.64
RETP07949 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RETP07949 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RETP07949 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RETP07949 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
RETP07949 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
RETP07949 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RETP07949 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.82□□□□□ -1.64
RETP07949 UQCRBP1-201ENST00000421129 336 ntBASIC4.82□□□□□ -1.64
RETP07949 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.82□□□□□ -1.64
RETP07949 FABP7P1-201ENST00000424004 391 ntBASIC4.82□□□□□ -1.64
RETP07949 AL451062.2-201ENST00000427515 271 ntBASIC4.82□□□□□ -1.64
RETP07949 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
RETP07949 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.82□□□□□ -1.64
RETP07949 AC004980.3-201ENST00000447046 365 ntBASIC4.82□□□□□ -1.64
RETP07949 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.82□□□□□ -1.64
RETP07949 SNORA84-201ENST00000459229 133 ntBASIC4.82□□□□□ -1.64
RETP07949 AC022795.1-201ENST00000473808 480 ntBASIC4.82□□□□□ -1.64
RETP07949 BUD31P1-201ENST00000521828 359 ntBASIC4.82□□□□□ -1.64
RETP07949 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.82□□□□□ -1.64
RETP07949 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.82□□□□□ -1.64
RETP07949 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.82□□□□□ -1.64
RETP07949 NDUFB4P11-201ENST00000560510 395 ntBASIC4.82□□□□□ -1.64
RETP07949 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms