Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 RNU1-15P-201ENST00000353977 144 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 RNA5SP428-201ENST00000365129 132 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 MIR421-201ENST00000365696 85 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 MIR600-201ENST00000385007 98 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 JKAMPP1-201ENST00000413804 919 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AL590806.1-201ENST00000415818 853 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CHEK2P5-201ENST00000423877 246 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 RPL21P43-201ENST00000425440 472 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC022022.1-201ENST00000430304 178 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CFL1P1-202ENST00000432948 411 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 Z99127.2-201ENST00000441426 334 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AL606490.1-201ENST00000452266 765 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CALM1P2-201ENST00000452941 448 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 Z92846.1-201ENST00000456203 268 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 RPS4XP1-201ENST00000482189 787 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 RN7SL101P-201ENST00000496350 279 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SNORA48.9-201ENST00000516419 162 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 NPM1P6-201ENST00000521088 871 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC087888.1-201ENST00000550884 1254 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CD24P2-201ENST00000565486 219 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 TVP23CP2-201ENST00000571473 623 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC016911.1-201ENST00000613297 452 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 WBP1LP8-201ENST00000617401 327 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC092159.4-201ENST00000624944 550 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC136428.4-201ENST00000634254 1155 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 IQCB2P-201ENST00000401788 1633 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC011493.1-201ENST00000596753 1632 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AC107027.3-201ENST00000565095 3473 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 VPS35P1-201ENST00000563400 1518 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 RN7SKP160-201ENST00000363804 340 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AL512430.2-201ENST00000406786 339 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 RN7SKP126-201ENST00000411143 300 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 PA2G4P6-201ENST00000438325 1197 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC104629.2-201ENST00000468627 598 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 PCNAP1-201ENST00000505363 709 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 OR7E10P-201ENST00000526420 991 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC007225.2-201ENST00000562529 256 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 EIF1P5-201ENST00000585002 234 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 FKBP1AP1-201ENST00000594588 318 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AC090953.1-201ENST00000604305 1092 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AP000864.1-201ENST00000609424 650 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms