Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HMGB1P26-201ENST00000452520 628 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC099560.2-201ENST00000457554 255 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 CABYRP1-201ENST00000465493 1045 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC109462.1-201ENST00000491087 368 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 MRPS33P2-201ENST00000507850 322 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 RNA5SP228-201ENST00000516232 133 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC28A1O00337 NPM1P47-201ENST00000560843 856 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 MIR1269B-201ENST00000580405 75 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AC005520.3-201ENST00000602874 370 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AC007497.1-201ENST00000610421 561 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC025016.1-201ENST00000616746 682 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC091948.2-201ENST00000636510 279 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SLC28A1O00337 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 MTND4P21-201ENST00000453886 1357 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 AC120338.1-201ENST00000625074 1541 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC28A1O00337 AC107027.3-201ENST00000565095 3473 ntBASIC4.6□□□□□ -1.67
SLC28A1O00337 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC010329.2-201ENST00000595195 2737 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AL672167.1-205ENST00000641112 3080 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AC027290.2-201ENST00000623210 18662 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 RNU6-304P-201ENST00000364855 107 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AC093719.1-202ENST00000392735 373 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 SNORA11.3-201ENST00000408471 128 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AL160175.1-201ENST00000428124 247 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AL591623.2-201ENST00000449978 222 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 BUD31P1-201ENST00000521828 359 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC28A1O00337 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 OR4H6P-202ENST00000603819 340 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 SUMO2P15-201ENST00000604285 278 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 AC110792.4-201ENST00000609843 298 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC28A1O00337 uc_338.9-201ENST00000617424 182 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 SNORA11.6-201ENST00000619030 128 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC28A1O00337 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC007342.8-201ENST00000623278 678 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC28A1O00337 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AL596275.2-204ENST00000641628 552 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AL596275.2-206ENST00000641957 626 ntBASIC4.59□□□□□ -1.67
SLC28A1O00337 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
SLC28A1O00337 AC092435.4-201ENST00000623012 4159 ntBASIC4.59□□□□□ -1.68
SLC28A1O00337 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SLC28A1O00337 CCT8P1-201ENST00000413611 1657 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC28A1O00337 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AP000756.2-201ENST00000624168 2567 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 RAD1P1-201ENST00000231383 813 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 OR56B2P-201ENST00000317102 954 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SLC28A1O00337 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC28A1O00337 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 RN7SKP199-201ENST00000410325 305 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC28A1O00337 PPIAP13-201ENST00000434706 478 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC093414.1-201ENST00000434712 514 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC28A1O00337 ELOCP10-201ENST00000440624 327 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC007000.2-201ENST00000442564 487 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms