Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RBFOX3A6NFN3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RBFOX3A6NFN3 AC009229.4-201ENST00000623854 1947 ntBASIC3.68□□□□□ -1.82
RBFOX3A6NFN3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RBFOX3A6NFN3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC074029.4-201ENST00000624796 1859 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RN7SKP160-201ENST00000363804 340 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RNA5SP234-201ENST00000363916 119 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RN7SKP124-201ENST00000364730 341 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RNU1-77P-201ENST00000390868 162 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL589647.1-201ENST00000402485 466 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RN7SKP59-201ENST00000410520 314 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RAC1P3-201ENST00000416129 580 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 TBCAP2-201ENST00000416175 326 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC093655.2-201ENST00000425735 631 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL121578.1-201ENST00000428051 892 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 FAM96AP1-201ENST00000430879 482 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 RPS17P8-201ENST00000434525 335 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ELOCP8-201ENST00000439309 332 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ELOCP15-201ENST00000442090 332 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC133473.1-201ENST00000455173 299 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 SCARNA21.2-201ENST00000516600 166 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 OR10G5P-201ENST00000532733 358 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 UBTFL9-201ENST00000534504 1148 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC134349.2-201ENST00000535136 910 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL049839.1-201ENST00000556151 657 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC093249.4-201ENST00000564755 259 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC027281.1-201ENST00000574178 758 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AP000919.1-201ENST00000582850 985 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC084373.1-201ENST00000603311 235 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC079395.2-201ENST00000610982 737 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 MIR6826-201ENST00000617808 98 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC233309.1-201ENST00000619522 751 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC091905.2-201ENST00000623143 306 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 ZNF733P-202ENST00000444809 1573 ntBASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RBFOX3A6NFN3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RNA5SP151-201ENST00000365632 117 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 MIR708-201ENST00000390708 88 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RNA5SP339-201ENST00000390987 122 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 SNORD65-201ENST00000391079 73 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC079355.1-201ENST00000421770 223 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RPL12P34-201ENST00000424532 479 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms