Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 IGHV1-14-201ENST00000523391 241 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 OR5AN2P-201ENST00000534535 896 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC022916.3-201ENST00000592961 742 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL136139.1-201ENST00000605568 222 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC019193.2-201ENST00000610012 634 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 U1.25-201ENST00000614085 162 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 U1.31-201ENST00000620022 160 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 BIN2P1-201ENST00000504996 1530 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC130360.2-201ENST00000533477 1556 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SHISA3A0PJX4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.71□□□□□ -1.49
SHISA3A0PJX4 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
SHISA3A0PJX4 AC027575.3-201ENST00000583058 2747 ntBASIC5.71□□□□□ -1.49
SHISA3A0PJX4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SHISA3A0PJX4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OR11H4-201ENST00000315409 1082 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RNU6-317P-201ENST00000384031 107 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.481-201ENST00000384373 102 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RNU6-692P-201ENST00000384496 107 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RNU6-878P-201ENST00000384578 110 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RN7SKP296-201ENST00000411185 341 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RNU2-6P-201ENST00000411404 190 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 GRPEL2P2-201ENST00000421856 670 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 USP9YP36-201ENST00000424581 829 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 SNRPGP6-201ENST00000451124 220 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC019080.2-201ENST00000453859 394 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC099563.1-201ENST00000456086 418 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RPSAP48-201ENST00000466509 889 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC096741.1-201ENST00000472250 846 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC017015.1-201ENST00000477387 286 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.701-201ENST00000516812 110 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 COX6B1P4-201ENST00000519826 484 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 HNRNPCP8-201ENST00000528764 888 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL121594.2-201ENST00000541658 472 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OR4H6P-201ENST00000563771 921 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RN7SL270P-201ENST00000579643 281 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC011840.5-201ENST00000582125 771 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AP001180.3-201ENST00000582221 145 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC233702.7-202ENST00000582941 211 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC012507.3-201ENST00000603556 477 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL590032.1-201ENST00000604920 252 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC011891.2-201ENST00000604949 397 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AP001521.1-201ENST00000609150 300 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms